pyrox.dev
Merge pull request #217897 from DavidCromp/nest
nest: fix Python & Darwin
authored by
Weijia Wang
and committed by
GitHub
c8ba0464
6c585cde
+19
-4
pkgs/applications/science/biology/nest/default.nix
+19
-4
pkgs/applications/science/biology/nest/default.nix
···
5
5
, cmake
6
6
, gsl
7
7
, libtool
8
+
, findutils
9
+
, llvmPackages
8
10
, mpi
9
11
, nest
10
12
, pkg-config
13
+
, boost
11
14
, python3
12
15
, readline
13
16
, autoPatchelfHook
···
37
40
nativeBuildInputs = [
38
41
cmake
39
42
pkg-config
40
-
autoPatchelfHook
43
+
findutils
41
44
];
42
45
43
46
buildInputs = [
44
47
gsl
45
48
readline
46
49
libtool # libltdl
50
+
boost
47
51
] ++ lib.optionals withPython [
48
52
python3
49
53
python3.pkgs.cython
50
-
] ++ lib.optional withMpi mpi;
54
+
] ++ lib.optional withMpi mpi
55
+
++ lib.optional stdenv.isDarwin llvmPackages.openmp;
56
+
57
+
propagatedBuildInputs = with python3.pkgs; [
58
+
numpy
59
+
];
51
60
52
61
cmakeFlags = [
53
62
"-Dwith-python=${if withPython then "ON" else "OFF"}"
54
63
"-Dwith-mpi=${if withMpi then "ON" else "OFF"}"
55
-
"-Dwith-openmp=${if stdenv.isDarwin then "OFF" else "ON"}"
64
+
"-Dwith-openmp=ON"
56
65
];
57
66
67
+
postInstall = ''
68
+
# Alternative to autoPatchElf, moves libraries where
69
+
# Nest expects them to be
70
+
find $out/lib/nest -type f -exec ln -s {} $out/lib \;
71
+
'';
72
+
58
73
passthru.tests.version = testers.testVersion {
59
74
package = nest;
60
75
command = "nest --version";
···
64
79
description = "NEST is a command line tool for simulating neural networks";
65
80
homepage = "https://www.nest-simulator.org/";
66
81
license = licenses.gpl2;
67
-
maintainers = with maintainers; [ jiegec ];
82
+
maintainers = with maintainers; [ jiegec davidcromp ];
68
83
platforms = platforms.unix;
69
84
};
70
85
}