pyrox.dev
Merge pull request #217897 from DavidCromp/nest
nest: fix Python & Darwin
authored by
Weijia Wang
and committed by
GitHub
c8ba0464
6c585cde
+19
-4
pkgs/applications/science/biology/nest/default.nix
+19
-4
pkgs/applications/science/biology/nest/default.nix
···
5
, cmake
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, gsl
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, libtool
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, mpi
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, nest
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, pkg-config
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, python3
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, readline
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, autoPatchelfHook
···
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nativeBuildInputs = [
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cmake
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pkg-config
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-
autoPatchelfHook
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];
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buildInputs = [
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gsl
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readline
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libtool # libltdl
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] ++ lib.optionals withPython [
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python3
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python3.pkgs.cython
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-
] ++ lib.optional withMpi mpi;
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cmakeFlags = [
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"-Dwith-python=${if withPython then "ON" else "OFF"}"
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"-Dwith-mpi=${if withMpi then "ON" else "OFF"}"
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-
"-Dwith-openmp=${if stdenv.isDarwin then "OFF" else "ON"}"
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];
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passthru.tests.version = testers.testVersion {
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package = nest;
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command = "nest --version";
···
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description = "NEST is a command line tool for simulating neural networks";
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homepage = "https://www.nest-simulator.org/";
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license = licenses.gpl2;
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-
maintainers = with maintainers; [ jiegec ];
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platforms = platforms.unix;
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};
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}
···
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, cmake
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, gsl
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, libtool
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+
, findutils
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+
, llvmPackages
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, mpi
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, nest
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, pkg-config
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+
, boost
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, python3
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, readline
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, autoPatchelfHook
···
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nativeBuildInputs = [
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cmake
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pkg-config
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+
findutils
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];
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buildInputs = [
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gsl
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readline
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libtool # libltdl
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+
boost
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] ++ lib.optionals withPython [
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python3
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python3.pkgs.cython
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+
] ++ lib.optional withMpi mpi
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+
++ lib.optional stdenv.isDarwin llvmPackages.openmp;
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+
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+
propagatedBuildInputs = with python3.pkgs; [
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+
numpy
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+
];
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cmakeFlags = [
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"-Dwith-python=${if withPython then "ON" else "OFF"}"
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"-Dwith-mpi=${if withMpi then "ON" else "OFF"}"
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+
"-Dwith-openmp=ON"
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];
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+
postInstall = ''
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+
# Alternative to autoPatchElf, moves libraries where
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+
# Nest expects them to be
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+
find $out/lib/nest -type f -exec ln -s {} $out/lib \;
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+
'';
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+
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passthru.tests.version = testers.testVersion {
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package = nest;
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command = "nest --version";
···
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description = "NEST is a command line tool for simulating neural networks";
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homepage = "https://www.nest-simulator.org/";
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license = licenses.gpl2;
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+
maintainers = with maintainers; [ jiegec davidcromp ];
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platforms = platforms.unix;
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};
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}