Merge staging-next into staging

pkgs/applications/science/electronics/openroad/default.nix

···
   clp, # for or-tools
   cudd,
   eigen,
+  gtest,
   glpk,
   lcov,
   lemon-graph,
···
 in
 mkDerivation rec {
   pname = "openroad";
-  version = "2.0-unstable-2024-12-22";
+  version = "2.0-unstable-2024-12-31";
 
   src = fetchFromGitHub {
     owner = "The-OpenROAD-Project";
     repo = "OpenROAD";
-    rev = "51302eb80b11576a01171d33452c362301d55143";
+    rev = "21cf29eda317e0c7777fbfaa3f384ec9fab1a0f9";
     fetchSubmodules = true;
-    hash = "sha256-xFeZo6GjKKee7fTrzN4TNNL8eeTDJXyQGPkIKU/WvIc=";
+    hash = "sha256-cRETSW8cG/Q0hgxaFJjtnBqsIU0r6/kCRy1+5gJfC9o=";
   };
 
+  patches = [
+    ./swig43-compat.patch # https://github.com/The-OpenROAD-Project/OpenROAD/issues/6451
+  ];
+
   nativeBuildInputs = [
     bison
     cmake
     doxygen
     flex
     git
+    gtest
     pkg-config
     swig
   ];
···
     patchShebangs --build etc/find_messages.py
   '';
 
-  # Enable output images from the placer.
   cmakeFlags = [
-    # Tries to download gtest 1.13 as part of the build. We currently rely on
-    # the regression tests so we can get by without building unit tests.
-    "-DENABLE_TESTS=OFF"
+    "-DENABLE_TESTS=ON"
     "-DUSE_SYSTEM_BOOST=ON"
     "-DUSE_SYSTEM_ABC=OFF"
     "-DUSE_SYSTEM_OPENSTA=OFF"
-    "-DOPENROAD_VERSION=${src.rev}"
+    "-DOPENROAD_VERSION=${version}_${src.rev}"
+    "-DCMAKE_RULE_MESSAGES=OFF"
     "-DTCL_LIBRARY=${tcl}/lib/libtcl.so"
     "-DTCL_HEADER=${tcl}/include/tcl.h"
   ];
···
   # to see if there are any breaking changes in unstable that should be vendored as well.
   doCheck = true;
   checkPhase = ''
+    # Disable two tests that are failing curently.
+    sed 's/^.*partition_gcd/# \0/g' -i src/par/test/CTestTestfile.cmake
+    make test
     ../test/regression
   '';
 

pkgs/applications/science/electronics/openroad/swig43-compat.patch

···
+diff --git a/src/odb/src/swig/python/dbtypes.i b/src/odb/src/swig/python/dbtypes.i
+index 37305d55e..d85f2915e 100644
+--- a/src/odb/src/swig/python/dbtypes.i
++++ b/src/odb/src/swig/python/dbtypes.i
+@@ -271,7 +271,7 @@ WRAP_OBJECT_RETURN_REF(odb::dbViaParams, params_return)
+   swig_type_info *tf = SWIG_TypeQuery("odb::dbShape" "*");
+   for(std::vector<odb::dbShape>::iterator it = $1->begin(); it != $1->end(); it++) {
+     PyObject *o = SWIG_NewInstanceObj(&(*it), tf, 0);
+-    $result = SWIG_Python_AppendOutput($result, o);
++    $result = SWIG_Python_AppendOutput($result, o, 0);
+   }
+ }
+ 
+@@ -283,14 +283,14 @@ WRAP_OBJECT_RETURN_REF(odb::dbViaParams, params_return)
+     auto layer = it->second;
+     PyObject *layer_swig = SWIG_NewInstanceObj(layer, tf, 0);
+     PyObject *tuple = PyTuple_Pack(2, PyFloat_FromDouble(value), layer_swig);
+-    $result = SWIG_Python_AppendOutput($result, tuple);
++    $result = SWIG_Python_AppendOutput($result, tuple, 0);
+   }
+ }
+ 
+ %typemap(argout) std::vector<int> &OUTPUT {
+   for(auto it = $1->begin(); it != $1->end(); it++) {
+     PyObject *obj = PyInt_FromLong((long)*it);
+-    $result = SWIG_Python_AppendOutput($result, obj);
++    $result = SWIG_Python_AppendOutput($result, obj, 0);
+   }
+ }
+ 

pkgs/by-name/an/antora-lunr-extension/package.nix

···
   version = "1.0.0-alpha.8";
 
   src = fetchFromGitLab {
-    hash = "sha256-GplCwhUl8jurD4FfO6/T3Vo1WFjg+rtAjWeIh35unk4=";
     owner = "antora";
     repo = pname;
     rev = "v${version}";
+    hash = "sha256-GplCwhUl8jurD4FfO6/T3Vo1WFjg+rtAjWeIh35unk4=";
   };
 
   npmDepsHash = "sha256-EtjZL6U/uSGSYSqtuatCkdWP0NHxRuht13D9OaM4x00=";

pkgs/by-name/an/antora-ui-default/package.nix

···
 }:
 let
   srcFetchFromGitLab = {
-    hash = "sha256-q2FwkwzjanxTIxjMpCyMpzPt782uYZiWVdZ7Eev79oM=";
     owner = "trueNAHO";
     repo = "antora-ui-default";
     rev = "11f563294248e9b64124b9289d639e349f2e9f5f";
+    hash = "sha256-gUQLLjnWZ1OsAe005IOPIfoM0qmjoevcUuGBRD3oHXA=";
   };
 in
 stdenvNoCC.mkDerivation {

pkgs/by-name/bo/bonsai/package.nix

···
 
 stdenv.mkDerivation (finalAttrs: {
   pname = "bonsai";
-  version = "1.2.0";
+  version = "1.2.1";
 
   src = fetchFromSourcehut {
     owner = "~stacyharper";
     repo = "bonsai";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-Ggk+OKaRE+kVa8/ij3znuY3b0dT2F5F1CSse4l0MAA8=";
+    hash = "sha256-WAne0628lELQanUv2lg8Y9QEikZVAT7Xtkndhs8Ozjw=";
   };
 
   nativeBuildInputs = [

pkgs/by-name/db/dbip-asn-lite/package.nix

···
 }:
 stdenvNoCC.mkDerivation (finalAttrs: {
   pname = "dbip-asn-lite";
-  version = "2024-12";
+  version = "2025-01";
 
   src = fetchurl {
     url = "https://download.db-ip.com/free/dbip-asn-lite-${finalAttrs.version}.mmdb.gz";
-    hash = "sha256-tzeXJzgTG6AB46dCYqtdECqMm2nh9PfPigMvRif2+cM=";
+    hash = "sha256-cRlhlP5ml+swBZGiLpVH5s7nvPiHUi7qxM2GajoeK+Y=";
   };
 
   dontUnpack = true;

pkgs/by-name/db/dbip-city-lite/package.nix

···
 }:
 stdenvNoCC.mkDerivation (finalAttrs: {
   pname = "dbip-city-lite";
-  version = "2024-12";
+  version = "2025-01";
 
   src = fetchurl {
     url = "https://download.db-ip.com/free/dbip-city-lite-${finalAttrs.version}.mmdb.gz";
-    hash = "sha256-IkZ6d9CP+AgYXaWmQTfTz2MTHEV7h/f1HiOAGXxBH+g=";
+    hash = "sha256-fBS2JASkZaLNCjNAadNkrctixTkDvpkTUYP0yUHBXnw=";
   };
 
   dontUnpack = true;

pkgs/by-name/db/dbip-country-lite/package.nix

···
 }:
 stdenvNoCC.mkDerivation (finalAttrs: {
   pname = "dbip-country-lite";
-  version = "2024-12";
+  version = "2025-01";
 
   src = fetchurl {
     url = "https://download.db-ip.com/free/dbip-country-lite-${finalAttrs.version}.mmdb.gz";
-    hash = "sha256-58g4ch1N1vPPymYx6M7X3Q6l6Sbr5GkEXv/Vi7K9Ivk=";
+    hash = "sha256-PVpqo1t6V0kdVqA1aEgU0UqwhzmLLMHYB6gyoMusVv8=";
   };
 
   dontUnpack = true;

pkgs/by-name/ec/ecapture/package.nix

···
 
 buildGoModule rec {
   pname = "ecapture";
-  version = "0.9.1";
+  version = "0.9.2";
 
   src = fetchFromGitHub {
     owner = "gojue";
     repo = "ecapture";
     tag = "v${version}";
-    hash = "sha256-ucauZ1nvsiNxeqMcMHbUaKidAGF/XW7hi04W+Bv6I6Q=";
+    hash = "sha256-UPWREeyB2YLYU3B4Rxr5oPoOfksL/lnllWyaFxhAe/0=";
     fetchSubmodules = true;
   };
 
···
     in
     [ "-skip=^${builtins.concatStringsSep "$|^" skippedTests}$" ];
 
-  vendorHash = "sha256-A+0ASVHMzNcuLsP9F55hvGjflLg68p0ckj6kPbjdg4E=";
+  vendorHash = "sha256-8ilfqPt5Phuj5Uaf90+Ir/DFN27oW5Fd+Wsp34/EU9M=";
 
   passthru.updateScript = nix-update-script { };
 

pkgs/by-name/ha/harper/package.nix

···
 
 rustPlatform.buildRustPackage rec {
   pname = "harper";
-  version = "0.13.0";
+  version = "0.14.0";
 
   src = fetchFromGitHub {
     owner = "elijah-potter";
     repo = "harper";
     rev = "v${version}";
-    hash = "sha256-X1mTqaqOqeAM7mq3nNrE2ULZ1zaAxZIqp0p1wdlDwgk=";
+    hash = "sha256-YKfhvwm8TuKpM81qcVgL15AdiQaI7PXvRq1pWThwmo0=";
   };
 
-  cargoHash = "sha256-0RJ0Kpht4gqZTBdjld1Wi5r9FN5RB74KboxODmlHoko=";
+  cargoHash = "sha256-Gf0GJVWefZlMXpnJytAdmM/I9y7bXoCilUZs/HK0Vdw=";
 
   meta = {
     description = "Grammar Checker for Developers";

pkgs/by-name/mi/mieru/package.nix

···
 
 buildGoModule rec {
   pname = "mieru";
-  version = "3.9.0";
+  version = "3.10.0";
 
   src = fetchFromGitHub {
     owner = "enfein";
     repo = "mieru";
     rev = "v${version}";
-    hash = "sha256-59TWABRIH3FEOyLvZ+jn7b3jhI0comjU4Mrl4Ggx2eA=";
+    hash = "sha256-4uJi8+kpVBjigTkLmV9fL0igmcOt5Gb40qkQHYR8kCU=";
   };
 
   vendorHash = "sha256-hSTKhn39xKZx1N9x66EH/ql4oP4qn0eysGTbUk9mRAk=";

pkgs/by-name/op/openturns/package.nix

···
 in
 stdenv.mkDerivation (finalAttrs: {
   pname = "openturns";
-  version = "1.23";
+  version = "1.24";
 
   src = fetchFromGitHub {
     owner = "openturns";
     repo = "openturns";
     rev = "v${finalAttrs.version}";
-    hash = "sha256-csl5cZvxU8fdLKvh04ZWKizClrHqF79c7tAMSejo2lk=";
+    hash = "sha256-88wxgifLuF/P/qeMLVP0S5Agutf022Dsysu38mh9+8w=";
   };
 
   nativeBuildInputs = [

pkgs/by-name/si/sirikali/package.nix

···
 
 stdenv.mkDerivation rec {
   pname = "sirikali";
-  version = "1.7.2";
+  version = "1.8.0";
 
   src = fetchFromGitHub {
     owner = "mhogomchungu";
     repo = "sirikali";
     rev = version;
-    hash = "sha256-UtgK+q06J6T6RJ8jQiwzg5yVtgGZaZzmfadNyXxTCIk=";
+    hash = "sha256-zEiX0eAsmfWDXehxetkqXbdXhB53DE5LDyglMBijckI=";
   };
 
   buildInputs =

pkgs/by-name/st/streamlink/package.nix

···
 
 python3Packages.buildPythonApplication rec {
   pname = "streamlink";
-  version = "7.0.0";
+  version = "7.1.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-UaQGKGLmeV1pQEbKbnBUnW0TWDxkDRUFlmgEsOA/7/I=";
+    hash = "sha256-wYge0LulNhLZedmpGLfewFb8k80gKlsHoIDlVo29q0w=";
   };
 
   patches = [
···
     requests
     trio
     trio-websocket
-    typing-extensions
     urllib3
     websocket-client
   ];

pkgs/by-name/v2/v2ray-domain-list-community/package.nix

···
 let
   generator = pkgsBuildBuild.buildGoModule rec {
     pname = "v2ray-domain-list-community";
-    version = "20241210004721";
+    version = "20241221105938";
     src = fetchFromGitHub {
       owner = "v2fly";
       repo = "domain-list-community";
       rev = version;
-      hash = "sha256-CiIjD6hI2rdulK/rqViLqB2YotpHd5ftOOxJncIcYS4=";
+      hash = "sha256-k42qnHQY9bfSjyGGtaqKdIxlvU/C7TiN8sD0AiRQmVU=";
     };
     vendorHash = "sha256-NLh14rXRci4hgDkBJVJDIDvobndB7KYRKAX7UjyqSsg=";
     meta = with lib; {

pkgs/development/beam-modules/elixir-ls/default.nix

···
 
 let
   pname = "elixir-ls";
-  version = "0.25.0";
+  version = "0.26.1";
   src = fetchFromGitHub {
     owner = "elixir-lsp";
     repo = "elixir-ls";
     rev = "v${version}";
-    hash = "sha256-7Lrv62R0otFPAfUAip1H4VcnBaV4QyDZkcBZTW7yq8I=";
+    hash = "sha256-fGjHDzQUBROFlv+AIzArRv+Q7RWPTizMFyYXQJGQzjA=";
   };
 in
 mixRelease {
···
   mixFodDeps = fetchMixDeps {
     pname = "mix-deps-${pname}";
     inherit src version elixir;
-    hash = "sha256-yR2ttnrtYcWFotBMIfOLmJzEO9NKy3SqiKJZ4mmlkdA=";
+    hash = "sha256-EUWySBI082cNXbHZKQKEisXffe0/UpupNcHj1GT7Mek=";
   };
 
   # elixir-ls is an umbrella app

pkgs/development/python-modules/ifcopenshell/default.nix

···
   pytestCheckHook,
   # fetchers
   fetchFromGitHub,
+  fetchpatch,
   gitUpdater,
   # build tools
   cmake,
   swig,
   # native dependencies
   eigen,
-  boost179,
+  boost,
   cgal,
   gmp,
   hdf5,
···
     hash = "sha256-tnj14lBEkUZNDM9J1sRhNA7OkWTWa5JPTSF8hui3q7k=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "ifcopenshell-boost-1.86-mt19937.patch";
+      url = "https://github.com/IfcOpenShell/IfcOpenShell/commit/1fe168d331123920eeb9a96e542fcc1453de57fe.patch";
+      hash = "sha256-oZDEL8cPcEu83lW+qSvCbmDGYpaNNRrptW9MLu2pN70=";
+    })
+
+    (fetchpatch {
+      name = "ifcopenshell-boost-1.86-json.patch";
+      url = "https://github.com/IfcOpenShell/IfcOpenShell/commit/88b861737c7c206d0e7307f90d37467e9585515c.patch";
+      hash = "sha256-zMoQcBWRdtavL0xdsr53SqyG6CZoeon8/mmJhrw85lc=";
+    })
+  ];
+
   nativeBuildInputs = [
     # c++
     cmake
···
   buildInputs = [
     # ifcopenshell needs stdc++
     (lib.getLib stdenv.cc.cc)
-    boost179
+    boost
     cgal
     eigen
     gmp

pkgs/development/python-modules/loguru/default.nix

···
   stdenv,
   buildPythonPackage,
   colorama,
+  exceptiongroup,
   fetchFromGitHub,
+  flit-core,
   freezegun,
+  pytest-mypy-plugins,
+  pytest-xdist,
   pytestCheckHook,
   pythonOlder,
-  pytest-xdist,
 }:
 
 buildPythonPackage rec {
   pname = "loguru";
-  version = "0.7.2";
-  format = "setuptools";
+  version = "0.7.3";
+
+  pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "Delgan";
     repo = pname;
-    rev = "refs/tags/${version}";
-    hash = "sha256-1xcPAOOhjFmWSxmPj6NICRur3ITOuQRNNKPJlfp89Jw=";
+    tag = version;
+    hash = "sha256-tccEzzs9TtFAZM9s43cskF9llc81Ng28LqedjLiE1m4=";
   };
 
+  build-system = [ flit-core ];
+
   nativeCheckInputs = [
     pytestCheckHook
     pytest-xdist # massive speedup, not tested by upstream
     colorama
     freezegun
-  ];
+    pytest-mypy-plugins
+  ] ++ lib.optional (pythonOlder "3.10") exceptiongroup;
 
-  disabledTestPaths = [
-    "tests/test_type_hinting.py" # avoid dependency on mypy
-  ] ++ lib.optionals stdenv.hostPlatform.isDarwin [ "tests/test_multiprocessing.py" ];
+  disabledTestPaths = lib.optionals stdenv.hostPlatform.isDarwin [ "tests/test_multiprocessing.py" ];
 
   disabledTests =
     [
···
 
   pythonImportsCheck = [ "loguru" ];
 
-  meta = with lib; {
+  meta = {
     description = "Python logging made (stupidly) simple";
     homepage = "https://github.com/Delgan/loguru";
     changelog = "https://github.com/delgan/loguru/releases/tag/${version}";
-    license = licenses.mit;
-    maintainers = with maintainers; [
+    license = lib.licenses.mit;
+    maintainers = with lib.maintainers; [
       jakewaksbaum
       rmcgibbo
     ];

pkgs/top-level/python-packages.nix

···
 
   python-mapnik = callPackage ../development/python-modules/python-mapnik rec {
     inherit (pkgs) pkg-config cairo icu libjpeg libpng libtiff libwebp proj zlib;
-    boost = pkgs.boost182.override {
+    boost = pkgs.boost.override {
       enablePython = true;
       inherit python;
     };
···
   rdflib = callPackage ../development/python-modules/rdflib { };
 
   rdkit = callPackage ../development/python-modules/rdkit {
-    boost = pkgs.boost182.override {
+    boost = pkgs.boost.override {
       enablePython = true;
       inherit python;
     };