byarielm.fyi
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README.md
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README.md
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<div style="backgroud-color: #f5f5f5; padding: 10px">
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library(scImmuCC)
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data(package="scImmuCC)
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data(test_data,package="scImmuCC") # load the test data
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data(package="scImmuCC)
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data(test_data,package="scImmuCC") # load the test data
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count <- as.matrix(test_data) # Convert test data to matrix
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count <- as.matrix(test_data) # Convert test data to matrix
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test <- scImmuCC_Layered(count = count ,Non_Immune = FALSE)
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test <- scImmuCC_Layered(count = count ,Non_Immune = FALSE)
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</div>
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library(scImmuCC)
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count <- read.csv(file=filename) #read your scRNA-Seq file
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dim(count)
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count <- as.matrix(count)
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test <- scImmuCC_Layered(test_data,Non_Immune=FALSE) #if your data have non-immune cell, Nn_Immune = TRUE
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The annotation results will be output in your current running directory。