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python3Packages.biopandas: init at 0.4.1
natsukium
2 years ago
be04cbeb
7dc64e9b
+64
2 changed files
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pkgs
development
python-modules
biopandas
default.nix
top-level
python-packages.nix
+62
pkgs/development/python-modules/biopandas/default.nix
reviewed
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{ lib
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, buildPythonPackage
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, fetchFromGitHub
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, looseversion
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, mmtf-python
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, nose
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, numpy
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, pandas
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, pythonRelaxDepsHook
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}:
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buildPythonPackage rec {
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pname = "biopandas";
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version = "0.4.1";
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format = "setuptools";
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src = fetchFromGitHub {
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owner = "BioPandas";
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repo = "biopandas";
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rev = "refs/tags/v${version}";
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hash = "sha256-PRdemBo+bB2xJWmF2NylFTfNwEEo67i6XSaeDAFmQ/c=";
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};
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nativeBuildInputs = [
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pythonRelaxDepsHook
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];
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pythonRelaxDeps = [
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"looseversion"
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];
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propagatedBuildInputs = [
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numpy
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pandas
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mmtf-python
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looseversion
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];
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nativeCheckInputs = [
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nose
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];
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checkPhase = ''
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runHook preCheck
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nosetests
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runHook postCheck
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'';
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pythonImportsCheck = [
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"biopandas"
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];
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meta = {
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description = "Working with molecular structures in pandas DataFrames";
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homepage = "https://github.com/BioPandas/biopandas";
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changelog = "https://github.com/BioPandas/biopandas/releases/tag/${src.rev}";
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license = lib.licenses.bsd3;
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maintainers = with lib.maintainers; [ natsukium ];
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};
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}
+2
pkgs/top-level/python-packages.nix
reviewed
···
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binwalk-full = self.binwalk.override { visualizationSupport = true; };
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biopandas = callPackage ../development/python-modules/biopandas { };
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biopython = callPackage ../development/python-modules/biopython { };
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biplist = callPackage ../development/python-modules/biplist { };