Merge master into staging-next

nixos/tests/all-tests.nix

···
   grocy = handleTest ./grocy.nix {};
   grub = handleTest ./grub.nix {};
   gvisor = handleTest ./gvisor.nix {};
-  hadoop.all = handleTestOn [ "x86_64-linux" ] ./hadoop/hadoop.nix {};
-  hadoop.hdfs = handleTestOn [ "x86_64-linux" ] ./hadoop/hdfs.nix {};
-  hadoop.yarn = handleTestOn [ "x86_64-linux" ] ./hadoop/yarn.nix {};
+  hadoop.all = handleTestOn [ "x86_64-linux" "aarch64-linux" ] ./hadoop/hadoop.nix {};
+  hadoop.hdfs = handleTestOn [ "x86_64-linux" "aarch64-linux" ] ./hadoop/hdfs.nix {};
+  hadoop.yarn = handleTestOn [ "x86_64-linux" "aarch64-linux" ] ./hadoop/yarn.nix {};
   haka = handleTest ./haka.nix {};
   haproxy = handleTest ./haproxy.nix {};
   hardened = handleTest ./hardened.nix {};

pkgs/applications/editors/vim/plugins/generated.nix

···
     meta.homepage = "https://github.com/vim-scripts/emodeline/";
   };
 
+  everforest = buildVimPluginFrom2Nix {
+    pname = "everforest";
+    version = "2022-02-20";
+    src = fetchFromGitHub {
+      owner = "sainnhe";
+      repo = "everforest";
+      rev = "7c5e520962a57f7cd42bb0b9eab268795375d26e";
+      sha256 = "IBDWDvSpUHHgE2zslYfvznHyQmisbRZsF0D80YqcKto=";
+    };
+    meta.homepage = "https://github.com/sainnhe/everforest/";
+  };
+
   falcon = buildVimPluginFrom2Nix {
     pname = "falcon";
     version = "2021-12-19";

pkgs/applications/editors/vim/plugins/vim-plugin-names

···
 saadparwaiz1/cmp_luasnip
 saecki/crates.nvim
 sainnhe/edge
+sainnhe/everforest
 sainnhe/gruvbox-material
 sainnhe/sonokai
 sakhnik/nvim-gdb

pkgs/applications/editors/vscode/extensions/default.nix

···
         };
       };
 
+      bierner.emojisense = buildVscodeMarketplaceExtension {
+        mktplcRef = {
+          name = "emojisense";
+          publisher = "bierner";
+          version = "0.9.0";
+          sha256 = "0gpcpwh57lqlynsrkv3smykndb46xjh7r85lb291wdklq5ahmb2j";
+        };
+        meta = with lib; {
+          license = licenses.mit;
+        };
+      };
+
+      bierner.markdown-checkbox = buildVscodeMarketplaceExtension {
+        mktplcRef = {
+          name = "markdown-checkbox";
+          publisher = "bierner";
+          version = "0.3.1";
+          sha256 = "0x57dnr6ksqxi28g1c392k04vxy0vdni9nl4xps3i5zh0pyxizhw";
+        };
+        meta = with lib; {
+          license = licenses.mit;
+        };
+      };
+
+      bierner.markdown-emoji = buildVscodeMarketplaceExtension {
+        mktplcRef = {
+          name = "markdown-emoji";
+          publisher = "bierner";
+          version = "0.2.1";
+          sha256 = "1lcg2b39jydl40wcfrbgshl2i1r58k92c7dipz0hl1fa1v23vj4v";
+        };
+        meta = with lib; {
+          license = licenses.mit;
+        };
+      };
+
       bradlc.vscode-tailwindcss = buildVscodeMarketplaceExtension {
         mktplcRef = {
           name = "vscode-tailwindcss";

pkgs/applications/misc/playonlinux/default.nix

···
 , steam-run-native
 # needed for avoiding crash on file selector
 , gsettings-desktop-schemas
+, glib
+, wrapGAppsHook
 }:
 
 let
···
     ./0001-fix-locale.patch
   ];
 
-  nativeBuildInputs = [ makeWrapper ];
+  nativeBuildInputs = [ makeWrapper wrapGAppsHook ];
 
   preBuild = ''
     makeFlagsArray+=(PYTHON="python -m py_compile")
   '';
 
   buildInputs = [
+    glib
     xorg.libX11
     libGL
     python

pkgs/applications/networking/cluster/hadoop/default.nix

···
-{ lib, stdenv, fetchurl, makeWrapper, autoPatchelfHook
-, jdk8_headless, jdk11_headless
-, bash, coreutils, which
-, bzip2, cyrus_sasl , protobuf3_7, snappy, zlib, zstd
+{ lib
+, stdenv
+, fetchurl
+, makeWrapper
+, autoPatchelfHook
+, jdk8_headless
+, jdk11_headless
+, bash
+, coreutils
+, which
+, bzip2
+, cyrus_sasl
+, protobuf3_7
+, snappy
+, zlib
+, zstd
 , openssl
 }:
 
 with lib;
 
+assert elem stdenv.system [ "x86_64-linux" "x86_64-darwin" "aarch64-linux" "aarch64-darwin" ];
+
 let
-  common = { pname, version, untarDir ? "${pname}-${version}", sha256, jdk, openssl, nativeLibs ? [ ], libPatches ? "" }:
+  common = { pname, version, untarDir ? "${pname}-${version}", sha256, jdk, openssl ? null, nativeLibs ? [ ], libPatches ? "" }:
     stdenv.mkDerivation rec {
       inherit pname version jdk libPatches untarDir openssl;
       src = fetchurl {
-        url = "mirror://apache/hadoop/common/hadoop-${version}/hadoop-${version}.tar.gz";
-        inherit sha256;
+        url = "mirror://apache/hadoop/common/hadoop-${version}/hadoop-${version}" + optionalString stdenv.isAarch64 "-aarch64" + ".tar.gz";
+        sha256 = sha256.${stdenv.system};
       };
+      doCheck = true;
 
       nativeBuildInputs = [ makeWrapper ]
-        ++ optional (nativeLibs != [] || libPatches != "") [ autoPatchelfHook ];
+        ++ optional (stdenv.isLinux && (nativeLibs != [ ] || libPatches != "")) [ autoPatchelfHook ];
       buildInputs = [ openssl ] ++ nativeLibs;
 
       installPhase = ''
···
           computers, each of which may be prone to failures.
         '';
         maintainers = with maintainers; [ volth illustris ];
-        platforms = [ "x86_64-linux" ];
+        platforms = attrNames sha256;
       };
-
     };
 in
 {
   # Different version of hadoop support different java runtime versions
   # https://cwiki.apache.org/confluence/display/HADOOP/Hadoop+Java+Versions
-  hadoop_3_3 = common rec {
-    pname = "hadoop";
-    version = "3.3.1";
-    sha256 = "1b3v16ihysqaxw8za1r5jlnphy8dwhivdx2d0z64309w57ihlxxd";
-    untarDir = "${pname}-${version}";
-    jdk = jdk11_headless;
-    inherit openssl;
-    # TODO: Package and add Intel Storage Acceleration Library
-    nativeLibs = [ stdenv.cc.cc.lib protobuf3_7 zlib snappy ];
-    libPatches = ''
-      ln -s ${getLib cyrus_sasl}/lib/libsasl2.so $out/lib/${untarDir}/lib/native/libsasl2.so.2
-      ln -s ${getLib openssl}/lib/libcrypto.so $out/lib/${untarDir}/lib/native/
-      ln -s ${getLib zlib}/lib/libz.so.1 $out/lib/${untarDir}/lib/native/
-      ln -s ${getLib zstd}/lib/libzstd.so.1 $out/lib/${untarDir}/lib/native/
-      ln -s ${getLib bzip2}/lib/libbz2.so.1 $out/lib/${untarDir}/lib/native/
-      patchelf --add-rpath ${jdk.home}/lib/server $out/lib/${untarDir}/lib/native/libnativetask.so.1.0.0
-    '';
-  };
+  hadoop_3_3 =
+    common
+      (rec {
+        pname = "hadoop";
+        version = "3.3.1";
+        untarDir = "${pname}-${version}";
+        sha256 = rec {
+          x86_64-linux = "1b3v16ihysqaxw8za1r5jlnphy8dwhivdx2d0z64309w57ihlxxd";
+          x86_64-darwin = x86_64-linux;
+          aarch64-linux = "00ln18vpi07jq2slk3kplyhcj8ad41n0yl880q5cihilk7daclxz";
+          aarch64-darwin = aarch64-linux;
+        };
+
+        inherit openssl;
+        nativeLibs = [ stdenv.cc.cc.lib protobuf3_7 zlib snappy ];
+        libPatches = ''
+          ln -s ${getLib cyrus_sasl}/lib/libsasl2.so $out/lib/${untarDir}/lib/native/libsasl2.so.2
+          ln -s ${getLib openssl}/lib/libcrypto.so $out/lib/${untarDir}/lib/native/
+          ln -s ${getLib zlib}/lib/libz.so.1 $out/lib/${untarDir}/lib/native/
+          ln -s ${getLib zstd}/lib/libzstd.so.1 $out/lib/${untarDir}/lib/native/
+          ln -s ${getLib bzip2}/lib/libbz2.so.1 $out/lib/${untarDir}/lib/native/
+        '' + optionalString stdenv.isLinux "patchelf --add-rpath ${jdk.home}/lib/server $out/lib/${untarDir}/lib/native/libnativetask.so.1.0.0";
+        jdk = jdk11_headless;
+      });
   hadoop_3_2 = common rec {
     pname = "hadoop";
     version = "3.2.2";
-    sha256 = "1hxq297cqvkfgz2yfdiwa3l28g44i2abv5921k2d6b4pqd33prwp";
+    sha256.x86_64-linux = "1hxq297cqvkfgz2yfdiwa3l28g44i2abv5921k2d6b4pqd33prwp";
     jdk = jdk8_headless;
     # not using native libs because of broken openssl_1_0_2 dependency
     # can be manually overriden
-    openssl = null;
   };
   hadoop2 = common rec {
     pname = "hadoop";
     version = "2.10.1";
-    sha256 = "1w31x4bk9f2swnx8qxx0cgwfg8vbpm6cy5lvfnbbpl3rsjhmyg97";
+    sha256.x86_64-linux = "1w31x4bk9f2swnx8qxx0cgwfg8vbpm6cy5lvfnbbpl3rsjhmyg97";
     jdk = jdk8_headless;
-    openssl = null;
   };
 }

pkgs/applications/networking/instant-messengers/zoom-us/default.nix

···
 }:
 
 let
-  version = "5.9.3.1911";
+  version = "5.9.6.2225";
   srcs = {
     x86_64-linux = fetchurl {
       url = "https://zoom.us/client/${version}/zoom_x86_64.pkg.tar.xz";
-      sha256 = "0pamn028k96z0j9xzv56szk7sy0czd9myqm4p3hps1gkczc9wzs4";
+      sha256 = "0rynpw2fjn9j75f34rk0rgqn9wzyzgzmwh1a3xcx7hqingv45k53";
     };
   };
 

pkgs/applications/video/clapper/default.nix

···
 , desktop-file-utils
 , makeWrapper
 , shared-mime-info
-, wrapGAppsHook
+, wrapGAppsHook4
 , meson
 , gjs
 , gtk4
···
     pkg-config
     python3
     shared-mime-info # for update-mime-database
-    wrapGAppsHook # for gsettings
+    wrapGAppsHook4 # for gsettings
   ];
 
   buildInputs = [

pkgs/data/documentation/execline-man-pages/default.nix

···
 
 buildManPages {
   pname = "execline-man-pages";
-  version = "2.8.1.0.3";
-  sha256 = "1n7c75lmyrjzzcbwjl6fxhfs4k29qlr66r1q35799h942cn4li7v";
+  version = "2.8.1.0.4";
+  sha256 = "1cxi09dlzvjbilmzgmr3xvwvx0l3s1874k3gr85kbjnvp1c1r6cd";
   description = "Port of the documentation for the execline suite to mdoc";
   maintainers = [ lib.maintainers.sternenseemann ];
 }

pkgs/data/documentation/s6-man-pages/default.nix

···
 
 buildManPages {
   pname = "s6-man-pages";
-  version = "2.11.0.0.5";
+  version = "2.11.0.1.1";
   sha256 = "03gl0vvdaqfb5hs0dfdbs9djxiyq3abcx9vwgkfw22b1rm2fa0r6";
   description = "Port of the documentation for the s6 supervision suite to mdoc";
   maintainers = [ lib.maintainers.sternenseemann ];

pkgs/data/documentation/s6-networking-man-pages/default.nix

···
 
 buildManPages {
   pname = "s6-networking-man-pages";
-  version = "2.5.0.0.2";
-  sha256 = "1ix8qrivp9prw0m401d7s9vkxhw16a4sxfhrs7abf9qqhs2zkd1r";
+  version = "2.5.1.0.1";
+  sha256 = "1h87s3wixsms8ys7gvm1s9d8pzn73q5j4sgybpi3gmr55d4cwra4";
   description = "Port of the documentation for the s6-networking suite to mdoc";
   maintainers = [ lib.maintainers.sternenseemann ];
 }

pkgs/desktops/gnome/default.nix

···
 
   gitg = callPackage ./misc/gitg { };
 
-  libgnome-games-support = callPackage ./misc/libgnome-games-support { };
-
   gnome-applets = callPackage ./misc/gnome-applets { };
 
   gnome-flashback = callPackage ./misc/gnome-flashback { };
···
 }) // lib.optionalAttrs (config.allowAliases or true) {
 #### Legacy aliases. They need to be outside the scope or they will shadow the attributes from parent scope.
 
+  libgnome-games-support = pkgs.libgnome-games-support; # added 2022-02-19
+
   bijiben = throw "The ‘gnome.bijiben’ alias was removed on 2022-01-13. Please use ‘gnome.gnome-notes’ directly."; # added 2018-09-26
   evolution_data_server = throw "The ‘gnome.evolution_data_server’ alias was removed on 2022-01-13. Please use ‘gnome.evolution-data-server’ directly."; # added 2018-02-25
   geocode_glib = throw "The ‘gnome.geocode_glib’ alias was removed on 2022-01-13. Please use ‘pkgs.geocode-glib’ directly."; # added 2018-02-25
···
   gnome_themes_standard = throw "The ‘gnome.gnome_themes_standard’ alias was removed on 2022-01-13. Please use ‘gnome.gnome-themes-standard’ directly."; # added 2018-02-25
   gnome-tweak-tool = throw "The ‘gnome.gnome-tweak-tool’ alias was removed on 2022-01-13. Please use ‘gnome.gnome-tweaks’ directly."; # added 2018-03-21
   gsettings_desktop_schemas = throw "The ‘gnome.gsettings_desktop_schemas’ alias was removed on 2022-01-13. Please use ‘gnome.gsettings-desktop-schemas’ directly."; # added 2018-02-25
-  libgames-support = throw "The ‘gnome.libgames-support’ alias was removed on 2022-01-13. Please use ‘gnome.libgnome-games-support’ directly."; # added 2018-03-14
+  libgames-support = throw "The ‘gnome.libgames-support’ alias was removed on 2022-01-13. Please use ‘pkgs.libgnome-games-support’ directly."; # added 2018-03-14
   libgnome_keyring = throw "The ‘gnome.libgnome_keyring’ alias was removed on 2022-01-13. Please use ‘gnome.libgnome-keyring’ directly."; # added 2018-02-25
   rarian = throw "The ‘gnome.rarian’ alias was removed on 2022-01-13. Please use ‘pkgs.rarian’ directly."; # added 2018-04-25
   networkmanager_fortisslvpn = throw "The ‘gnome.networkmanager_fortisslvpn’ alias was removed on 2022-01-13. Please use ‘gnome.networkmanager-fortisslvpn’ directly."; # added 2018-02-25

pkgs/desktops/gnome/games/gnome-2048/default.nix

···
 , itstool
 , clutter-gtk
 , libgee
+, libgnome-games-support
 , gnome
 , gtk3
 }:
···
   buildInputs = [
     clutter-gtk
     libgee
-    gnome.libgnome-games-support
+    libgnome-games-support
     gtk3
   ];
 

pkgs/desktops/gnome/misc/libgnome-games-support/default.nix pkgs/development/libraries/libgnome-games-support/default.nix

···
   passthru = {
     updateScript = gnome.updateScript {
       packageName = pname;
-      attrPath = "gnome.${pname}";
       versionPolicy = "odd-unstable";
     };
   };

pkgs/development/libraries/accountsservice/default.nix

···
 { lib
 , stdenv
 , fetchurl
-, fetchpatch
 , substituteAll
 , pkg-config
 , glib
···
 
 stdenv.mkDerivation rec {
   pname = "accountsservice";
-  version = "22.07.5";
+  version = "22.08.8";
 
   outputs = [ "out" "dev" ];
 
   src = fetchurl {
     url = "https://www.freedesktop.org/software/accountsservice/accountsservice-${version}.tar.xz";
-    sha256 = "IdRJwN6tilQ86o8R5x6wSWwDXXMOpIOTOXowKzpMfBo=";
+    sha256 = "kJmXp2kZ/n3BOKmgHOpwvWItWpMtvJ+xMBARMCOno5E=";
   };
 
   patches = [
···
     # Do not ignore third-party (e.g Pantheon) extensions not matching FHS path scheme.
     # Fixes https://github.com/NixOS/nixpkgs/issues/72396
     ./drop-prefix-check-extensions.patch
-
-    # Work around not being able to set profile picture in GNOME Settings.
-    # https://github.com/NixOS/nixpkgs/issues/85357
-    # https://gitlab.freedesktop.org/accountsservice/accountsservice/-/issues/98
-    # https://gitlab.gnome.org/GNOME/gnome-control-center/-/issues/1629
-    (fetchpatch {
-      url = "https://gitlab.freedesktop.org/accountsservice/accountsservice/-/commit/1ef3add46983af875adfed5d29954cbfb184f688.patch";
-      sha256 = "N4siK4SWkwYBnFa0JJUFgahi9XBkB/nS5yc+PyH3/iM=";
-    })
   ];
 
   nativeBuildInputs = [

pkgs/development/libraries/libgda/6.x.nix

···
 { lib
 , stdenv
 , fetchurl
+, fetchpatch
 , pkg-config
 , intltool
 , meson
···
     url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz";
     sha256 = "0w564z7krgjk19r39mi5qn4kggpdg9ggbyn9pb4aavb61r14npwr";
   };
+
+  patches = [
+    # Fix undefined behavior
+    (fetchpatch {
+      url = "https://gitlab.gnome.org/GNOME/libgda/-/commit/657b2f8497da907559a6769c5b1d2d7b5bd40688.patch";
+      sha256 = "Qx4S9KQsTAr4M0QJi0Xr5kKuHSp4NwZJHoRPYyxIyTk=";
+    })
+
+    # Fix building vapi
+    (fetchpatch {
+      url = "https://gitlab.gnome.org/GNOME/libgda/-/commit/57f618a3b2a3758ee3dcbf9bbdc566122dd8566d.patch";
+      sha256 = "pyfymUd61m1kHaGyMbUQMma+szB8mlqGWwcFBBQawf8=";
+    })
+  ];
 
   nativeBuildInputs = [
     pkg-config

pkgs/development/libraries/libgdata/default.nix

···
 
   buildInputs = [
     gcr
-    glib
-    libsoup
-    libxml2
     openssl
     p11-kit
     uhttpmock
   ];
 
   propagatedBuildInputs = [
+    glib
+    libsoup
+    libxml2
     gnome-online-accounts
     json-glib
   ];

pkgs/development/libraries/libsigcxx/3.0.nix

···
 
 stdenv.mkDerivation rec {
   pname = "libsigc++";
-  version = "3.0.7";
+  version = "3.2.0";
 
   src = fetchurl {
     url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz";
-    sha256 = "v76RwNCU6mu8bL05CbfZjGVh7qi22cDCWt2Qam6D1zM=";
+    sha256 = "jNy5huPwp8W0R0qjyDPWduYkaVCfSJkRDd8RjwQIJlE=";
   };
 
   nativeBuildInputs = [

pkgs/development/libraries/libsigcxx/default.nix

···
 
 stdenv.mkDerivation rec {
   pname = "libsigc++";
-  version = "2.10.7";
+  version = "2.10.8";
 
   src = fetchurl {
     url = "mirror://gnome/sources/${pname}/${lib.versions.majorMinor version}/${pname}-${version}.tar.xz";
-    sha256 = "sha256-0IKiznLHUPZrGkFavj6FLfLq4eivUwEPSsLqJhpHiDI=";
+    sha256 = "sha256-I1pAvsc0bHuCtqjKrgRWNT3AbnHxS8QUvMhYrxg4cZo=";
   };
 
   nativeBuildInputs = [ pkg-config meson ninja ];

pkgs/development/libraries/mpich/default.nix

···
 
 stdenv.mkDerivation  rec {
   pname = "mpich";
-  version = "4.0";
+  version = "4.0.1";
 
   src = fetchurl {
     url = "https://www.mpich.org/static/downloads/${version}/mpich-${version}.tar.gz";
-    sha256 = "0r7zzcj8b9dbf5lp2d81wcvffi38c1zchkgzyxckk51adv4ijx6z";
+    sha256 = "11rnljqwz6mr88ybj726mk710h7gvz20hy7labmz4jkkaa0gx8b6";
   };
 
   configureFlags = [

pkgs/development/libraries/qt-4.x/4.8/default.nix

···
 #    false build-time dependencies
 
 stdenv.mkDerivation rec {
-  pname = "qt";
+  pname = "qt" + lib.optionalString ( docs && demos && examples && developerBuild ) "-full";
   version = "4.8.7";
 
   src = fetchurl {

pkgs/development/libraries/science/math/bonmin/default.nix

···
+{ lib
+, stdenv
+, fetchFromGitHub
+, gfortran
+, pkg-config
+, blas
+, bzip2
+, cbc
+, clp
+, ipopt
+, lapack
+, libamplsolver
+, zlib
+}:
+
+assert (!blas.isILP64) && (!lapack.isILP64);
+
+stdenv.mkDerivation rec {
+  pname = "bonmin";
+  version = "1.8.8";
+
+  src = fetchFromGitHub {
+    owner = "coin-or";
+    repo = "Bonmin";
+    rev = "releases/${version}";
+    sha256 = "sha256-HU25WjvG01oL3U1wG6ivTcYaN51MMxgLdKZ3AkDNe2Y=";
+  };
+
+  nativeBuildInputs = [
+    gfortran
+    pkg-config
+  ];
+  buildInputs = [
+    blas
+    bzip2
+    cbc
+    clp
+    ipopt
+    lapack
+    libamplsolver
+    zlib
+  ];
+
+  meta = with lib; {
+    description = "An open-source code for solving general MINLP (Mixed Integer NonLinear Programming) problems";
+    homepage = "https://github.com/coin-or/Bonmin";
+    license = licenses.epl10;
+    platforms = platforms.unix;
+    maintainers = with maintainers; [ aanderse ];
+  };
+}

pkgs/development/libraries/science/math/trilinos/default.nix

···
 in
 stdenv.mkDerivation rec {
   pname = "trilinos";
-  version = "12.12.1"; # Xyce 7.4 requires version 12.12.1
+  # Xyce 7.4 requires version 12.12.1
+  # nixpkgs-update: no auto update
+  version = "12.12.1";
 
   src = fetchFromGitHub {
     owner = "trilinos";

pkgs/development/ocaml-modules/lwt/default.nix

···
 
   strictDeps = true;
 
-  nativeBuildInputs = [ pkg-config cppo ];
+  nativeBuildInputs = [ pkg-config cppo ]
+    ++ optional (!versionAtLeast ocaml.version "4.08") ocaml-syntax-shims;
   buildInputs = [ dune-configurator ]
-    ++ optional (!versionAtLeast ocaml.version "4.08") ocaml-syntax-shims
     ++ optional (!versionAtLeast ocaml.version "4.07") ncurses;
   propagatedBuildInputs = [ libev mmap ocplib-endian seq result ];
 

pkgs/development/python-modules/ckcc-protocol/default.nix

···
 
 buildPythonPackage rec {
   pname = "ckcc-protocol";
-  version = "1.2.1";
+  version = "1.3.0";
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "65f0313f9915b36068f6dfcab08e04671621e6227650443bc12e81997081ae7f";
+    sha256 = "sha256-UVLKJHDPxi9ivY3JyIySmce0NUhxIIlIxVTdPoXMaKM=";
   };
 
   propagatedBuildInputs = [ click ecdsa hidapi pyaes ];

pkgs/development/python-modules/django/4.nix

···
 
 buildPythonPackage rec {
   pname = "Django";
-  version = "4.0.2";
+  version = "4.0.3";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-EQ+1j7Euylngcq1Z/ELXcc1kLdei8kFlgqqdp6jvlUo=";
+    hash = "sha256-d/8ucFDjMkybZ+KbZwd1RWb1hRQRKprHMxD2DNUmGTA=";
   };
 
   patches = lib.optional withGdal

pkgs/development/python-modules/flipr-api/default.nix

···
 { lib
 , buildPythonPackage
 , fetchFromGitHub
-, fetchpatch
 , poetry-core
 , requests-mock
 , pythonOlder
···
 
 buildPythonPackage rec {
   pname = "flipr-api";
-  version = "1.4.1";
+  version = "1.4.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
···
     owner = "cnico";
     repo = pname;
     rev = version;
-    sha256 = "00qkzr2g38fpa7ndnbfx9m4d50lmz0j74nkxif3amnkbl4m6l5vn";
+    sha256 = "sha256-/G92WkWUr3T5T7VVzMERFVmLDfLz6m9rlZLQZCBQbCI=";
   };
 
   nativeBuildInputs = [
···
     pytestCheckHook
   ];
 
-  patches = [
-    # Switch to poetry-core, https://github.com/cnico/flipr-api/pull/4
-    (fetchpatch {
-      name = "switch-to-poetry-core.patch";
-      url = "https://github.com/cnico/flipr-api/commit/f14be1dfd4f46d4d43d9ea47e51cafca3cc18e86.patch";
-      sha256 = "1fdi19cq21zcjx4g132k480yhi5y0x5qj2l0h8k5zky5cdxs58r6";
-    })
+  pythonImportsCheck = [
+    "flipr_api"
   ];
-
-  pythonImportsCheck = [ "flipr_api" ];
 
   meta = with lib; {
     description = "Python client for Flipr API";

pkgs/development/python-modules/google-cloud-asset/default.nix

···
 
 buildPythonPackage rec {
   pname = "google-cloud-asset";
-  version = "3.7.1";
+  version = "3.8.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "848b3028d87358666c50b36253404c15d0a83686700c4586475997b1478d71d5";
+    sha256 = "sha256-4r1F7OgMS3TZdmEgXf5TtY4xv/YWInS6NyY6Ay4l8Ig=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/google-cloud-language/default.nix

···
 
 buildPythonPackage rec {
   pname = "google-cloud-language";
-  version = "2.3.2";
+  version = "2.4.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "90af7858911f52350191575bb729305114c3c80d1f585d0f6cea39ab1ab3e409";
+    sha256 = "sha256-ZqnwvpXfWGEc+yiImNGRGUXVJGiNzGFeMSmjn7MzuQE=";
   };
 
   propagatedBuildInputs = [ google-api-core libcst proto-plus ];

pkgs/development/python-modules/google-cloud-os-config/default.nix

···
 
 buildPythonPackage rec {
   pname = "google-cloud-os-config";
-  version = "1.10.0";
+  version = "1.11.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ng1XmHQ4h32cyz68PjHSzfSmCB2vrwkGkzCtz4vZmcM=";
+    sha256 = "sha256-1emoPnXxKRLzMQe+/ojTGvt2sYQJLSwu6N3C06p0T00=";
   };
 
   propagatedBuildInputs = [ google-api-core libcst proto-plus ];

pkgs/development/python-modules/google-cloud-texttospeech/default.nix

···
 
 buildPythonPackage rec {
   pname = "google-cloud-texttospeech";
-  version = "2.10.0";
+  version = "2.10.1";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-j2MSeQLw7udQrEqj9LtMqvaGSgTLiItdpN8dUTedYdI=";
+    sha256 = "sha256-5uFtHqZJgouUBgkGNqSBFQrWaU2Gm06icDjKx57HY94=";
   };
 
   propagatedBuildInputs = [ libcst google-api-core proto-plus ];

pkgs/development/python-modules/google-cloud-translate/default.nix

···
 
 buildPythonPackage rec {
   pname = "google-cloud-translate";
-  version = "3.7.0";
+  version = "3.7.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-dJ+i8D2p5yz3jh1BwedE4/EZfsH2B3AHokuyedWK6Jc=";
+    hash = "sha256-x4gSLVNo2uk93GWpvcPM20f0gJ1S3x/BVe13oNIpa0Y=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/graphql-subscription-manager/default.nix

···
 
 buildPythonPackage rec {
   pname = "graphql-subscription-manager";
-  version = "0.4.3";
+  version = "0.5.0";
 
   disabled = pythonOlder "3.7";
 
···
     owner = "Danielhiversen";
     repo = "PyGraphqlWebsocketManager";
     rev = version;
-    sha256 = "sha256-+LP+MDeHo0svoN/o0in6xtIqrfxs+UCBQRtBe4lZt+4=";
+    sha256 = "sha256-18GR0OZeEh6EQT0kKCJyq7ckvKYKDJn/lugN5xlRg64=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/ipyparallel/default.nix

···
 
 buildPythonPackage rec {
   pname = "ipyparallel";
-  version = "8.1.0";
+  version = "8.2.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "63f7e136e88f890e9802522fa5475dd81e7614ba06a8cfe4f80cc3056fdb7d73";
+    sha256 = "sha256-D9n2SlEgmAqJtkKZgGwSu434zuoVXlIAtwUwHrJAHhk=";
   };
 
   buildInputs = [ nose ];

pkgs/development/python-modules/jupyter-lsp/default.nix

···
+{ stdenv
+, lib
+, buildPythonPackage
+, fetchPypi
+, jupyter_server
+}:
+
+buildPythonPackage rec {
+  pname = "jupyter-lsp";
+  version = "1.5.1";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "sha256-dRq9NUE76ZpDMfNZewk0Gtx1VYntMgkawvaG2z1hJn4=";
+  };
+
+  propagatedBuildInputs = [
+    jupyter_server
+  ];
+  # tests require network
+  doCheck = false;
+  pythonImportsCheck = [ "jupyter_lsp" ];
+
+  meta = with lib; {
+    description = "Multi-Language Server WebSocket proxy for your Jupyter notebook or lab server";
+    homepage = "https://pypi.org/project/jupyter-lsp";
+    license = licenses.bsd3;
+    platforms = platforms.all;
+    maintainers = with maintainers; [ doronbehar ];
+  };
+}
+

pkgs/development/python-modules/jupyterlab-lsp/default.nix

···
+{ stdenv
+, lib
+, buildPythonPackage
+, fetchPypi
+, jupyterlab
+, jupyter-lsp
+}:
+
+buildPythonPackage rec {
+  pname = "jupyterlab-lsp";
+  version = "3.10.0";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "sha256-8/ZGTIwpFuPiYVGZZLF+1Gc8aJcWc3BirtXdahYKwt8=";
+  };
+
+  propagatedBuildInputs = [
+    jupyterlab
+    jupyter-lsp
+  ];
+  # No tests
+  doCheck = false;
+  pythonImportsCheck = [ "jupyterlab_lsp" ];
+
+  meta = with lib; {
+    description = "Language Server Protocol integration for Jupyter(Lab)";
+    homepage = "https://github.com/jupyter-lsp/jupyterlab-lsp";
+    license = licenses.bsd3;
+    platforms = platforms.all;
+    maintainers = with maintainers; [ doronbehar ];
+  };
+}

pkgs/development/python-modules/nitransforms/default.nix

···
 
 buildPythonPackage rec {
   pname = "nitransforms";
-  version = "21.0.0";
+  version = "22.0.0";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "njJqHqXVxldyGfmdM8GmgKdgIT4kMYLzcM5+ayR2EDo=";
+    sha256 = "sha256-iV9TEIGogIfbj+fmOGftoQqEdtZiewbHEw3hYlMEP4c=";
   };
 
   buildInputs = [ setuptools-scm toml ];

pkgs/development/python-modules/pyctr/default.nix

···
+{ lib, buildPythonPackage, fetchPypi, pythonOlder
+, pycryptodomex }:
+
+buildPythonPackage rec {
+  pname = "pyctr";
+  version = "0.6.0";
+  disabled = pythonOlder "3.7";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "sha256-05lMcsIeJIHI3LwHQTjr4M+bn1FG+GQscuGq34XxjK8=";
+  };
+
+  propagatedBuildInputs = [ pycryptodomex ];
+
+  pythonImportsCheck = [ "pyctr" ];
+
+  meta = with lib; {
+    description = "Python library to interact with Nintendo 3DS files";
+    license = licenses.mit;
+    maintainers = with maintainers; [ rileyinman ];
+    homepage = "https://github.com/ihaveamac/pyctr";
+  };
+}

pkgs/development/python-modules/python-gitlab/default.nix

···
 
 buildPythonPackage rec {
   pname = "python-gitlab";
-  version = "3.1.1";
+  version = "3.2.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-ytEzjB/xp5GnuueZXcYh4mx3378iW63kVqzsdRJ4KCU=";
+    sha256 = "sha256-j27oEQn+wjH8K3TixANbt94FSOr4LdEZ/ilN8sSlJL4=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/rich-rst/default.nix

···
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, docutils
+, rich
+}:
+
+buildPythonPackage rec {
+  pname = "rich-rst";
+  version = "1.1.5";
+  format = "pyproject";
+
+  src = fetchFromGitHub {
+    owner = "wasi-master";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "0g1whhw07jgy46a1x85pd23gs356j1cc229wqf5j3x4r11kin6i5";
+  };
+
+  propagatedBuildInputs = [ docutils rich ];
+
+  # Module has no tests
+  doCheck = false;
+
+  pythonImportsCheck = [ "rich_rst" ];
+
+  meta = with lib; {
+    description = "A beautiful reStructuredText renderer for rich";
+    homepage = "https://github.com/wasi-master/rich-rst";
+    license = licenses.mit;
+    maintainers = with maintainers; [ jyooru ];
+  };
+}

pkgs/development/python-modules/sphinxcontrib-plantuml/default.nix

···
 
 buildPythonPackage rec {
   pname = "sphinxcontrib-plantuml";
-  version = "0.22";
+  version = "0.23";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a42c7a13ab1ae9ed18e8e8b0f76b8d35dc476fdebe6e634354fe6fd0f261f686";
+    sha256 = "sha256-HVVRjwqG7NbJa6j/jIhK3KBbrD5Y52ppKjzRmqf0Ks8=";
   };
 
   # No tests included.

pkgs/development/python-modules/types-cryptography/default.nix

···
+{ lib
+, buildPythonPackage
+, fetchPypi
+, types-enum34
+, types-ipaddress
+}:
+
+buildPythonPackage rec {
+  pname = "types-cryptography";
+  version = "3.3.15";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0fr70phvg3zc4h41mv48g04x3f20y478y01ji3w1i2mqlxskm657";
+  };
+
+  pythonImportsCheck = [
+    "cryptography-stubs"
+  ];
+
+  propagatedBuildInputs = [ types-enum34 types-ipaddress ];
+
+  meta = with lib; {
+    description = "Typing stubs for cryptography";
+    homepage = "https://github.com/python/typeshed";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ jpetrucciani ];
+  };
+}

pkgs/development/python-modules/types-enum34/default.nix

···
+{ lib
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname = "types-enum34";
+  version = "1.1.8";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0421lr89vv3fpg77kkj5nmzd7z3nmhw4vh8ibsjp6vfh86b7d73g";
+  };
+
+  pythonImportsCheck = [
+    "enum-python2-stubs"
+  ];
+
+  meta = with lib; {
+    description = "Typing stubs for enum34";
+    homepage = "https://github.com/python/typeshed";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ jpetrucciani ];
+  };
+}

pkgs/development/python-modules/types-ipaddress/default.nix

···
+{ lib
+, buildPythonPackage
+, fetchPypi
+}:
+
+buildPythonPackage rec {
+  pname = "types-ipaddress";
+  version = "1.0.8";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0h9q9pjvw1ap5k70ygp750d096jkzymxlhx87yh0pr9mb6zg6gd0";
+  };
+
+  pythonImportsCheck = [
+    "ipaddress-python2-stubs"
+  ];
+
+  meta = with lib; {
+    description = "Typing stubs for ipaddress";
+    homepage = "https://github.com/python/typeshed";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ jpetrucciani ];
+  };
+}

pkgs/development/python-modules/types-paramiko/default.nix

···
+{ lib
+, buildPythonPackage
+, fetchPypi
+, types-cryptography
+}:
+
+buildPythonPackage rec {
+  pname = "types-paramiko";
+  version = "2.8.13";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "0xk5xqhfl3xmzrnzb17c5hj5zbh7fpyfyj35zjma32iivfkqd8lp";
+  };
+
+  pythonImportsCheck = [
+    "paramiko-stubs"
+  ];
+
+  propagatedBuildInputs = [ types-cryptography ];
+
+  meta = with lib; {
+    description = "Typing stubs for paramiko";
+    homepage = "https://github.com/python/typeshed";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ jpetrucciani ];
+  };
+}

pkgs/development/python-modules/zeroconf/default.nix

···
 
 buildPythonPackage rec {
   pname = "zeroconf";
-  version = "0.38.3";
+  version = "0.38.4";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
···
     owner = "jstasiak";
     repo = "python-zeroconf";
     rev = version;
-    sha256 = "sha256-pLTqnIbe7rTZrQFe//0/h5Tyx0GzJW+q9mUuDNifo/0=";
+    sha256 = "sha256-CLV1/maraSJ3GWnyN/0rLyEyWoQIL18rhm35llgvthw=";
   };
 
   propagatedBuildInputs = [

pkgs/development/tools/electron/default.nix

···
     headers = "0rxbij6qvi0xzcmbxf3fm1snvakaxp9c512z9ni36y98sgg4s3l8";
   };
 
-  electron_15 = mkElectron "15.3.7" {
-    armv7l-linux = "1cc5ce2ab6d795271f54e67a78eec607c0a14761ee1177078a157abad7aa61e6";
-    aarch64-linux = "caf7146c738207b78ea63e95fa055f36829bb360e2d81fce10513fae238f2750";
-    x86_64-linux = "e424dded1ac545634128bfb5c6195807aa96b7761be95f52ed760886f42874cc";
-    i686-linux = "9f1898f9c96672076a87ca559dd11788964347fd17316f0c24f75c9c53985ce5";
-    x86_64-darwin = "282f8737fdc73a3ddc82f56b4affc9f6fefec1b233e532e08d206344b657cd8a";
-    aarch64-darwin = "d64e12c680d60b535fea7de4322504db04a83e63e8557d8e9b3677a334911752";
-    headers = "0nfk75r72p5dgz0rdyqfqjmlwn2wlgn7h93a1v5ghjpwn1rp89m7";
+  electron_15 = mkElectron "15.4.0" {
+    armv7l-linux = "40c073a3b416f83264327bdf5e33b334ffcd56a729ef237360d66f520f670d16";
+    aarch64-linux = "ef18ba74b4fa34a26f9ee819bb908c60d0dd9ec2048414629979760f262d72f8";
+    x86_64-linux = "5bdea4cbf5559491e9ad9f365fa6f7ec26603fd6f68bfa8848f2884ebd51662d";
+    i686-linux = "636d0e28bb20ca127c9b8722fe39e7e7d95fc63bd15b156b7af563296b3d9595";
+    x86_64-darwin = "8a132b2be0f27c7e8fa9a91a8b4b0fcdf3ec571c721cb5f5610dc8a6b3f0fd26";
+    aarch64-darwin = "82b29c37a427464a9278d617435ca19f472b00689c9e58163e99f30b90f33046";
+    headers = "0fc1sck7g160klpqzfcqv9zc45ia914mrncyma58zzcbzpk6k6yb";
   };
 
-  electron_16 = mkElectron "16.0.9" {
-    armv7l-linux = "7071f18230f5d4bbf84d3f1955056f2a6952e5487dfdecb51708e419c0b1a594";
-    aarch64-linux = "a7873d1cb2b632c9c48a6942bf4a436463c07cc488f4b0b4575e0e4a496c357d";
-    x86_64-linux = "06d57bc1e59ebe046d5731d64eb67c41e793731e67aefbf33f4e3c23139285d4";
-    i686-linux = "8603545bdaec512380050ce6f9f1ef283514b960c8d6c8682eaa6563d93705b2";
-    x86_64-darwin = "d092af5e5fddb295e9ebb9b639006deec125b1f6b30896d22e98b84e5a74af40";
-    aarch64-darwin = "62fd4d033fd0ad62d1c13ac219bd68e76b1625c305097c7aa2ab799f45c9e879";
-    headers = "0d0jkjjfq32j09bjlpmx1hvi20rh8yfkfm7hfcv3xs831physbj5";
+  electron_16 = mkElectron "16.0.10" {
+    armv7l-linux = "1a72fe59011cfcc1f376f2948dd5a70d2f75d6c12fb682a0246d2e596227b5e0";
+    aarch64-linux = "46cd1393816364a666ead410505bce4b51d68ce872446a71d16886b88c4b275a";
+    x86_64-linux = "3b4779e41e27200ce5fa94d20f9df05ff5c757be6805eb0e8952fe198d66f324";
+    i686-linux = "9e1426a8135d3fe195ba9fc1a5ea5ad4d5ce96bd513691897b39106698e3c3c8";
+    x86_64-darwin = "00b0222efa67fbb29f723fabebc4221646ebd6d5fdc09524df9a203f63ce660c";
+    aarch64-darwin = "1203f6ec4e8b97312254ceb122ca4399f39ae67bfe1636e426a798c89ec2a9ee";
+    headers = "10f6px88vg6napyhniczi6l660qs4l5mm0b9gdlds4i1y94s1zrl";
   };
 
-  electron_17 = mkElectron "17.0.1" {
-    armv7l-linux = "0867f74427152c3b4110e11c9ce38e351531554868f62665b064f3d1dae5fd00";
-    aarch64-linux = "7715f7eaaa287f83b945f491c2ca1eb0befed93725d81c85d06f8584db3a6cc4";
-    x86_64-linux = "de789f548d6cc2ddff8db53b3bbfaac5631e90f14506935d2d7fafedf82e5adf";
-    i686-linux = "4e81ce43552f22e271527d5f7ab84db6dda61c0922f8b6350e44fa52967f2dd9";
-    x86_64-darwin = "d270858938e2f0e68479d91384e6f4d01be1d4e22b305dc2023ecd1a5e113d17";
-    aarch64-darwin = "aecf14a88ede956e93fee5b48b773ad4d8d6605424c9d69a45950b673c89f8ca";
-    headers = "1c3fl9fxmhkhvm825vmyxm8dm89xfy4iwqrb4ifmv5cz9dh9b9a8";
+  electron_17 = mkElectron "17.1.0" {
+    armv7l-linux = "09d92195821aad4ac03fbc858287a7372b6aa059081bb825d267853ee1b0425d";
+    aarch64-linux = "6a34d6802d44a391902f53baf0adc8b819d33e7c31b34614757b17b3223c9d1e";
+    x86_64-linux = "106ec28a5969366c1e1f642cc33ac41950c68bd182db23b04d7ac6886bfe28e8";
+    i686-linux = "19fe206be07a6df7f9f0ecdb411e3cafd3a53618edb19cc6adc77156f698444e";
+    x86_64-darwin = "bd80d6b0b62c9bec195d264aa21a255f4324a8b56849e04972c1fcc262757c31";
+    aarch64-darwin = "83fe2fc24976d09a0e0fcc3a60226f190cf9b67287fe4434d3d76d59fa45315c";
+    headers = "1zv1pigfbis1bsan28wx3bgkdwjc48pjq19wmxs73kd1khsy6w8r";
   };
 }

pkgs/os-specific/linux/upower/default.nix

···
 { lib
 , stdenv
-, fetchurl
+, fetchFromGitLab
 , pkg-config
+, rsync
 , libxslt
+, meson
+, ninja
+, python3
+, gtk-doc
 , docbook_xsl
 , udev
 , libgudev
···
 , libimobiledevice
 }:
 
-stdenv.mkDerivation {
+stdenv.mkDerivation rec {
   pname = "upower";
-  version = "0.99.13";
+  version = "0.99.15";
 
-  outputs = [ "out" "dev" ];
+  outputs = [ "out" "dev" "devdoc" ];
 
-  src = fetchurl {
-    url = "https://gitlab.freedesktop.org/upower/upower/uploads/177df5b9f9b76f25a2ad9da41aa0c1fa/upower-0.99.13.tar.xz";
-    sha256 = "sha256-XK1w+RVAzH3BIcsX4K1kXl5mPIaC9gp75C7jjNeyPXo=";
+  src = fetchFromGitLab {
+    domain = "gitlab.freedesktop.org";
+    owner = "upower";
+    repo = "upower";
+    rev = "v${version}";
+    sha256 = "sha256-GlLy2MPip21KOabdW8Vw6NVe3xhzsd9htxQ2xO/hZ/4=";
   };
 
   nativeBuildInputs = [
+    meson
+    ninja
+    python3
+    gtk-doc
     docbook_xsl
     gettext
     gobject-introspection
     libxslt
     pkg-config
+    rsync
   ];
 
   buildInputs = [
···
     libusb1
     udev
     systemd
-  ]
-  ++ lib.optional useIMobileDevice libimobiledevice
-  ;
+  ] ++ lib.optionals useIMobileDevice [
+    libimobiledevice
+  ];
 
   propagatedBuildInputs = [
     glib
   ];
 
-  configureFlags = [
+  mesonFlags = [
     "--localstatedir=/var"
-    "--with-backend=linux"
-    "--with-systemdsystemunitdir=${placeholder "out"}/etc/systemd/system"
-    "--with-systemdutildir=${placeholder "out"}/lib/systemd"
-    "--with-udevrulesdir=${placeholder "out"}/lib/udev/rules.d"
     "--sysconfdir=/etc"
+    "-Dos_backend=linux"
+    "-Dsystemdsystemunitdir=${placeholder "out"}/etc/systemd/system"
+    "-Dudevrulesdir=${placeholder "out"}/lib/udev/rules.d"
   ];
 
   doCheck = false; # fails with "env: './linux/integration-test': No such file or directory"
 
-  installFlags = [
-    "historydir=$(TMPDIR)/foo"
-    "sysconfdir=${placeholder "out"}/etc"
-  ];
+  postPatch = ''
+    patchShebangs src/linux/unittest_inspector.py
+  '';
+
+  postInstall = ''
+    # Move stuff from DESTDIR to proper location.
+    # We use rsync to merge the directories.
+    for dir in etc var; do
+        rsync --archive "${DESTDIR}/$dir" "$out"
+        rm --recursive "${DESTDIR}/$dir"
+    done
+    for o in out dev; do
+        rsync --archive "${DESTDIR}/''${!o}" "$(dirname "''${!o}")"
+        rm --recursive "${DESTDIR}/''${!o}"
+    done
+    # Ensure the DESTDIR is removed.
+    rmdir "${DESTDIR}/nix/store" "${DESTDIR}/nix" "${DESTDIR}"
+  '';
+
+  # HACK: We want to install configuration files to $out/etc
+  # but upower should read them from /etc on a NixOS system.
+  # With autotools, it was possible to override Make variables
+  # at install time but Meson does not support this
+  # so we need to convince it to install all files to a temporary
+  # location using DESTDIR and then move it to proper one in postInstall.
+  DESTDIR = "${placeholder "out"}/dest";
 
   meta = with lib; {
     homepage = "https://upower.freedesktop.org/";

pkgs/servers/gemini/agate/default.nix

···
-{ lib, stdenv, nixosTests, fetchFromGitHub, rustPlatform, libiconv, Security }:
+{ lib, stdenv, nixosTests, fetchFromGitHub, fetchpatch, rustPlatform, libiconv, Security }:
 
 rustPlatform.buildRustPackage rec {
   pname = "agate";
-  version = "3.2.2";
+  version = "3.2.3";
 
   src = fetchFromGitHub {
     owner = "mbrubeck";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-o4tjEIgDTj2EUbfaKCHZfvEKCwxNpsabU437kU+Vpnk=";
+    sha256 = "sha256-nkWk/0TIAHcYQjxbg0HnT+4S4Cinl22WfqHb9U6u5eI=";
   };
+  cargoSha256 = "sha256-aF86QpizJ+lMNmN9DQKA9o1QZWZObyQ3v3+HmT/s02g=";
 
-  cargoSha256 = "sha256-rE0I13dKbGgJmh6vF/cWvIZfqtKzzgn7pTiB3HJ7cgY=";
+  patches = [
+    # https://github.com/mbrubeck/agate/pull/143
+    (fetchpatch {
+      name = "fix-port-collision.patch";
+      url = "https://github.com/mbrubeck/agate/commit/2f5d7878ec9d0dd51762c4c7680fc9f825d8ecd5.patch";
+      sha256 = "sha256-NEFmfb0y97O2W96YggD+MgcN7tlFEi9T4FNzLCND77s=";
+    })
+  ];
 
   buildInputs = lib.optionals stdenv.isDarwin [ libiconv Security ];
 

pkgs/servers/headscale/default.nix

···
 
 buildGoModule rec {
   pname = "headscale";
-  version = "0.13.0";
+  version = "0.14.0";
 
   src = fetchFromGitHub {
     owner = "juanfont";
     repo = "headscale";
     rev = "v${version}";
-    sha256 = "sha256-nVGhLL7HN9m5zIZOFVOMYZXxUUx3WkLpeH/59kXoTHo=";
+    sha256 = "sha256-9nBFBvYAhybg97oU4mi899ss4/nzBCY95KfdkSs2f8s=";
   };
 
-  vendorSha256 = "sha256-v76UWaF6kdmuvABg6sDMmDpJ4HWvgliyEWAbAebK3wM=";
+  vendorSha256 = "sha256-qFoSK27D6bznksdm7Fl4SsVt13g2LSwuGe0As/MUo5o=";
 
   ldflags = [ "-s" "-w" "-X github.com/juanfont/headscale/cmd/headscale/cli.Version=v${version}" ];
 

pkgs/tools/misc/colord-gtk/default.nix

···
 , docbook_xml_dtd_412
 , libxslt
 , glib
+, withGtk4 ? false
 , gtk3
 , gtk4
 , pkg-config
···
 
   propagatedBuildInputs = [
     colord
+  ] ++ (if withGtk4 then [
+    gtk4
+  ] else [
     gtk3
-    gtk4
+  ]);
+
+  mesonFlags = [
+    "-Dgtk4=${lib.boolToString withGtk4}"
+    "-Dgtk3=${lib.boolToString (!withGtk4)}"
   ];
 
   meta = with lib; {
     homepage = "https://www.freedesktop.org/software/colord/intro.html";
     license = licenses.lgpl21Plus;
+    maintainers = teams.gnome.members;
     platforms = platforms.linux;
   };
 }

pkgs/tools/networking/amass/default.nix

···
 
 buildGoModule rec {
   pname = "amass";
-  version = "3.16.0";
+  version = "3.17.0";
 
   src = fetchFromGitHub {
     owner = "OWASP";
     repo = "Amass";
     rev = "v${version}";
-    sha256 = "sha256-V3FqiAvHnd3q3yhrhDaeka22R+mBqFdPjGqY4FGCx9M=";
+    sha256 = "sha256-Ml/NyxrqK17pAxUFu0U191BPdmnv4SCZPkBKLzGsk7c=";
   };
 
-  vendorSha256 = "sha256-0hor9Sldl8HhlKfYhWhb79wnZSMn5/Hg0Ux937qQkT4=";
+  vendorSha256 = "sha256-tGIZ8D1ecLV2HNXrBvLEVVQbmwoR1arwwLZ0oTx1b7k=";
 
   outputs = [ "out" "wordlists" ];
 

pkgs/tools/networking/networkmanager/libnma/default.nix

···
 , mobile-broadband-provider-info
 , gobject-introspection
 , gtk3
+, withGtk4 ? false
+, gtk4
 , withGnome ? true
 , gcr
 , glib
···
     networkmanager
     isocodes
     mobile-broadband-provider-info
+  ] ++ lib.optionals withGtk4 [
+    gtk4
   ] ++ lib.optionals withGnome [
     # advanced certificate chooser
     gcr
···
 
   mesonFlags = [
     "-Dgcr=${lib.boolToString withGnome}"
+    "-Dlibnma_gtk4=${lib.boolToString withGtk4}"
   ];
 
   postPatch = ''

pkgs/top-level/all-packages.nix

···
 
   colord-gtk = callPackage ../tools/misc/colord-gtk { };
 
+  colord-gtk4 = colord-gtk.override { withGtk4 = true; };
+
   colordiff = callPackage ../tools/text/colordiff { };
 
   connect = callPackage ../tools/networking/connect { };
···
   networkmanagerapplet = callPackage ../tools/networking/networkmanager/applet { };
 
   libnma = callPackage ../tools/networking/networkmanager/libnma { };
+
+  libnma-gtk4 = libnma.override { withGtk4 = true; };
 
   networkmanager_dmenu = callPackage ../tools/networking/networkmanager/dmenu  { };
 
···
 
   libgnome-keyring = callPackage ../development/libraries/libgnome-keyring { };
   libgnome-keyring3 = gnome.libgnome-keyring;
+
+  libgnome-games-support = callPackage ../development/libraries/libgnome-games-support { };
 
   libgnomekbd = callPackage ../development/libraries/libgnomekbd { };
 
···
 
   qmake4Hook = qmake48Hook;
 
-  qt48Full = appendToName "full" (qt48.override {
+  qt48Full = qt48.override {
     docs = true;
     demos = true;
     examples = true;
     developerBuild = true;
-  });
+  };
 
   qt512 = recurseIntoAttrs (makeOverridable
     (import ../development/libraries/qt-5/5.12) {
···
   blas-ilp64 = blas.override { isILP64 = true; };
 
   blas-reference = callPackage ../development/libraries/science/math/blas { };
+
+  bonmin = callPackage ../development/libraries/science/math/bonmin { };
 
   brial = callPackage ../development/libraries/science/math/brial { };
 

pkgs/top-level/python-packages.nix

···
 
   jupyter_core = callPackage ../development/python-modules/jupyter_core { };
 
+  jupyter-lsp = callPackage ../development/python-modules/jupyter-lsp { };
+
   jupyter_server = callPackage ../development/python-modules/jupyter_server { };
 
   jupyterhub = callPackage ../development/python-modules/jupyterhub { };
···
   jupyterlab_server = callPackage ../development/python-modules/jupyterlab_server { };
 
   jupyterlab-widgets = callPackage ../development/python-modules/jupyterlab-widgets { };
+
+  jupyterlab-lsp = callPackage ../development/python-modules/jupyterlab-lsp { };
 
   jupyter-packaging = callPackage ../development/python-modules/jupyter-packaging { };
 
···
 
   pyct = callPackage ../development/python-modules/pyct { };
 
+  pyctr = callPackage ../development/python-modules/pyctr { };
+
   pycuda = callPackage ../development/python-modules/pycuda {
     cudatoolkit = pkgs.cudatoolkit;
     inherit (pkgs.stdenv) mkDerivation;
···
   rflink = callPackage ../development/python-modules/rflink { };
 
   rich = callPackage ../development/python-modules/rich { };
+
+  rich-rst = callPackage ../development/python-modules/rich-rst { };
 
   rig = callPackage ../development/python-modules/rig { };
 
···
 
   typer = callPackage ../development/python-modules/typer { };
 
+  types-cryptography = callPackage ../development/python-modules/types-cryptography { };
+
   types-dateutil = callPackage ../development/python-modules/types-dateutil { };
 
   types-decorator = callPackage ../development/python-modules/types-decorator { };
+
+  types-enum34 = callPackage ../development/python-modules/types-enum34 { };
 
   types-freezegun = callPackage ../development/python-modules/types-freezegun { };
 
   types-futures = callPackage ../development/python-modules/types-futures { };
+
+  types-ipaddress = callPackage ../development/python-modules/types-ipaddress { };
+
+  types-paramiko = callPackage ../development/python-modules/types-paramiko { };
 
   types-protobuf = callPackage ../development/python-modules/types-protobuf { };