pyrox.dev
protege: init at 5.6.4
+43
pkgs/by-name/pr/protege/enforce-plugin-versions.patch
+43
pkgs/by-name/pr/protege/enforce-plugin-versions.patch
···
1
+
diff --git a/pom.xml b/pom.xml
2
+
index 839bed04..4cb5f392 100644
3
+
--- a/pom.xml
4
+
+++ b/pom.xml
5
+
@@ -358,6 +358,30 @@
6
+
<release>11</release>
7
+
</configuration>
8
+
</plugin>
9
+
+
10
+
+ <plugin>
11
+
+ <groupId>org.apache.maven.plugins</groupId>
12
+
+ <artifactId>maven-install-plugin</artifactId>
13
+
+ <version>3.1.1</version>
14
+
+ </plugin>
15
+
+
16
+
+ <plugin>
17
+
+ <groupId>org.apache.maven.plugins</groupId>
18
+
+ <artifactId>maven-site-plugin</artifactId>
19
+
+ <version>3.12.1</version>
20
+
+ </plugin>
21
+
+
22
+
+ <plugin>
23
+
+ <groupId>org.apache.maven.plugins</groupId>
24
+
+ <artifactId>maven-deploy-plugin</artifactId>
25
+
+ <version>3.1.1</version>
26
+
+ </plugin>
27
+
+
28
+
+ <plugin>
29
+
+ <groupId>org.apache.maven.plugins</groupId>
30
+
+ <artifactId>maven-jar-plugin</artifactId>
31
+
+ <version>3.3.0</version>
32
+
+ </plugin>
33
+
34
+
<plugin>
35
+
<groupId>org.apache.maven.plugins</groupId>
36
+
@@ -476,6 +494,7 @@
37
+
<requireMavenVersion>
38
+
<version>3.6.3</version>
39
+
</requireMavenVersion>
40
+
+ <requirePluginVersions/>
41
+
</rules>
42
+
</configuration>
43
+
</execution>
+93
pkgs/by-name/pr/protege/package.nix
+93
pkgs/by-name/pr/protege/package.nix
···
1
+
{ lib
2
+
, fetchFromGitHub
3
+
, copyDesktopItems
4
+
, iconConvTools
5
+
, makeDesktopItem
6
+
, makeWrapper
7
+
, jdk11
8
+
, maven
9
+
}:
10
+
11
+
let
12
+
mvn = maven.override { jdk = jdk11; };
13
+
in
14
+
mvn.buildMavenPackage rec {
15
+
pname = "protege";
16
+
version = "5.6.4";
17
+
18
+
src = fetchFromGitHub {
19
+
owner = "protegeproject";
20
+
repo = "protege";
21
+
rev = version;
22
+
hash = "sha256-Q3MHa7nCeF31n7JPltcemFBc/sJwGA9Ev0ymjQhY/U0=";
23
+
};
24
+
25
+
mvnHash = "sha256-kemP2gDv1CYuaoK0fwzBxdLTusarPasf2jCDQj/HPYE=";
26
+
27
+
patches = [
28
+
# Pin built-in Maven plugins to avoid checksum variations on Maven updates
29
+
./enforce-plugin-versions.patch
30
+
# Avoid building platform-dependent builds which embed their own JREs
31
+
./platform-independent-only.patch
32
+
];
33
+
34
+
nativeBuildInputs = [
35
+
copyDesktopItems
36
+
iconConvTools
37
+
jdk11
38
+
makeWrapper
39
+
];
40
+
41
+
installPhase = ''
42
+
runHook preInstall
43
+
44
+
mkdir -p $out/bin $out/share/protege
45
+
46
+
# Copy the application directory whole into the output, as it is used by the
47
+
# launcher script as a reference point to look for default configuration
48
+
mv protege-desktop/target/protege-${version}-platform-independent/Protege-${version} $out/Protege
49
+
50
+
# Place a wrapper for the launcher script into a default /bin location
51
+
makeWrapper $out/Protege/run.sh $out/bin/protege \
52
+
--set JAVA_HOME ${jdk11.home}
53
+
54
+
# Link all jars from within the standard /share/protege directory
55
+
ln -s -t $out/share/protege $out/Protege/bundles/*
56
+
57
+
# Generate and copy icons to where they can be found
58
+
icoFileToHiColorTheme $out/Protege/app/Protege.ico protege $out
59
+
60
+
runHook postInstall
61
+
'';
62
+
63
+
desktopItems = [
64
+
(makeDesktopItem {
65
+
name = pname;
66
+
desktopName = "Protege Desktop";
67
+
genericName = "Ontology Editor";
68
+
icon = "protege";
69
+
comment = meta.description;
70
+
categories = [ "Development" ];
71
+
exec = "protege";
72
+
})
73
+
];
74
+
75
+
meta = {
76
+
homepage = "https://protege.stanford.edu/";
77
+
downloadPage = "https://protege.stanford.edu/software.php#desktop-protege";
78
+
description = "A free and open-source OWL 2 ontology editor";
79
+
longDescription = ''
80
+
Protégé Desktop is a feature rich ontology editing environment with full
81
+
support for the OWL 2 Web Ontology Language, and direct in-memory
82
+
connections to description logic reasoners.
83
+
'';
84
+
maintainers = with lib.maintainers; [ nessdoor ];
85
+
license = with lib.licenses; [ bsd2 ];
86
+
# TODO Protege is able to run on Darwin as well, but I (@nessdoor) had no
87
+
# way of testing it nor any experience in packaging Darwin apps, so I
88
+
# will leave the task to someone who has the right tools and knowledge.
89
+
platforms = lib.platforms.unix;
90
+
mainProgram = "protege";
91
+
sourceProvenance = with lib.sourceTypes; [ fromSource binaryBytecode ];
92
+
};
93
+
}
+24
pkgs/by-name/pr/protege/platform-independent-only.patch
+24
pkgs/by-name/pr/protege/platform-independent-only.patch
···
1
+
diff --git a/protege-desktop/pom.xml b/protege-desktop/pom.xml
2
+
index 2f599708..60059308 100644
3
+
--- a/protege-desktop/pom.xml
4
+
+++ b/protege-desktop/pom.xml
5
+
@@ -110,9 +110,6 @@
6
+
</archiverConfig>
7
+
<descriptors>
8
+
<descriptor>src/main/assembly/protege-platform-independent.xml</descriptor>
9
+
- <descriptor>src/main/assembly/protege-os-x.xml</descriptor>
10
+
- <descriptor>src/main/assembly/protege-win.xml</descriptor>
11
+
- <descriptor>src/main/assembly/protege-linux.xml</descriptor>
12
+
</descriptors>
13
+
</configuration>
14
+
</execution>
15
+
@@ -165,9 +162,6 @@
16
+
</archiverConfig>
17
+
<descriptors>
18
+
<descriptor>src/main/assembly/protege-platform-independent.xml</descriptor>
19
+
- <descriptor>src/main/assembly/protege-os-x.xml</descriptor>
20
+
- <descriptor>src/main/assembly/protege-win.xml</descriptor>
21
+
- <descriptor>src/main/assembly/protege-linux.xml</descriptor>
22
+
</descriptors>
23
+
</configuration>
24
+
</execution>