pyrox.dev
Merge pull request #273382 from wegank/strelka-aarch64
strelka: add aarch64-linux support
authored by Weijia Wang and committed by GitHub 9a67c36f f4a98e5a
+23
-3
pkgs/applications/science/biology/strelka/default.nix
+23
-3
pkgs/applications/science/biology/strelka/default.nix
···
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-
{lib, stdenv, fetchFromGitHub, cmake, zlib, python2}:
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stdenv.mkDerivation rec {
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pname = "strelka";
···
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sha256 = "1nykbmim1124xh22nrhrsn8xgjb3s2y7akrdapn9sl1gdych4ppf";
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};
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nativeBuildInputs = [ cmake ];
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buildInputs = [ zlib python2 ];
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env.NIX_CFLAGS_COMPILE = toString [
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"-Wno-error=maybe-uninitialized"
···
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license = licenses.gpl3;
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homepage = "https://github.com/Illumina/strelka";
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maintainers = with maintainers; [ jbedo ];
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platforms = [ "x86_64-linux" ];
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};
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}
···
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{lib, stdenv, fetchFromGitHub, fetchpatch, cmake, boost, zlib, python2}:
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stdenv.mkDerivation rec {
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pname = "strelka";
···
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sha256 = "1nykbmim1124xh22nrhrsn8xgjb3s2y7akrdapn9sl1gdych4ppf";
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};
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patches = [
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# Pull pending fix for gcc-12:
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# https://github.com/Illumina/strelka/pull/204
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(fetchpatch {
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name = "limits.patch";
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url = "https://github.com/Illumina/strelka/commit/98272cd345c6e4c672e6a5b7721204fcac0502d6.patch";
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hash = "sha256-psBiuN32nvwZ+QX51JQjIdRhEE3k7PfwbkD10ckqvZk=";
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})
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];
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+
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postPatch = ''
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substituteInPlace src/cmake/boost.cmake \
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--replace "1.58.0" "${boost.version}" \
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--replace "Boost_USE_STATIC_LIBS ON" "Boost_USE_STATIC_LIBS OFF"
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'';
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+
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nativeBuildInputs = [ cmake ];
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buildInputs = [ boost zlib python2 ];
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+
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cmakeFlags = [
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"-DCMAKE_CXX_STANDARD=14"
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];
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env.NIX_CFLAGS_COMPILE = toString [
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"-Wno-error=maybe-uninitialized"
···
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license = licenses.gpl3;
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homepage = "https://github.com/Illumina/strelka";
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maintainers = with maintainers; [ jbedo ];
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+
platforms = platforms.linux;
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};
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}
+1
-1
pkgs/top-level/all-packages.nix
+1
-1
pkgs/top-level/all-packages.nix