Merge staging-next into staging

pkgs/applications/science/logic/verit/default.nix

···
   '';
 
   meta = with lib; {
-    broken = stdenv.isDarwin;
     description = "An open, trustable and efficient SMT-solver";
     homepage = "https://verit.loria.fr/";
     license = licenses.bsd3;

pkgs/applications/version-management/git-and-tools/gh/default.nix

···
 
 buildGoModule rec {
   pname = "gh";
-  version = "2.12.1";
+  version = "2.13.0";
 
   src = fetchFromGitHub {
     owner = "cli";
     repo = "cli";
     rev = "v${version}";
-    sha256 = "sha256-zKEHrnMTz+gPU1A9tjqUO5FLD1zQcnbU7pwVQnYI6uA=";
+    sha256 = "sha256-9FWmEujTUWexyqNQVagU/U9AyOZJdWL5y4Q0ZHRBxcc=";
   };
 
-  vendorSha256 = "sha256-sHRahwavPgowKE0EtDU4UNxIJU22edqlY0nOKkaQLPg=";
+  vendorSha256 = "sha256-a/+Dj66zT/W8rxvvXnJSdoyYhajMY1T3kEbrpC24tMU=";
 
   nativeBuildInputs = [ installShellFiles ];
 

pkgs/build-support/fetchgit/default.nix

···
   # needed for netrcPhase
   netrcImpureEnvVars ? []
 , meta ? {}
+, allowedRequisites ? null
 }:
 
 /* NOTE:
···
     "GIT_PROXY_COMMAND" "NIX_GIT_SSL_CAINFO" "SOCKS_SERVER"
   ];
 
-  inherit preferLocalBuild meta;
+
+  inherit preferLocalBuild meta allowedRequisites;
 
   passthru = {
     gitRepoUrl = url;

pkgs/development/python-modules/tensorflow/bin.nix

···
 , numpy
 , six
 , termcolor
+, packaging
 , protobuf
 , absl-py
 , grpcio
···
   pname = "tensorflow" + lib.optionalString cudaSupport "-gpu";
   inherit (packages) version;
   format = "wheel";
-
-  # See https://github.com/tensorflow/tensorflow/issues/55581#issuecomment-1101890383
-  disabled = pythonAtLeast "3.10" && !cudaSupport;
 
   src = let
     pyVerNoDot = lib.strings.stringAsChars (x: if x == "." then "" else x) python.pythonVersion;
···
     astunparse
     flatbuffers
     typing-extensions
+    packaging
     protobuf
     numpy
     scipy
···
 
     pushd dist
 
+    orig_name="$(echo ./*.whl)"
     wheel unpack --dest unpacked ./*.whl
     rm ./*.whl
     (
       cd unpacked/tensorflow*
       # Adjust dependency requirements:
-      # - Relax tensorflow-estimator version requirement that doesn't match what we have packaged
+      # - Relax flatbuffers, gast and tensorflow-estimator version requirements that don't match what we have packaged
       # - The purpose of python3Packages.libclang is not clear at the moment and we don't have it packaged yet
       # - keras and tensorlow-io-gcs-filesystem will be considered as optional for now.
       sed -i *.dist-info/METADATA \
-        -e "s/Requires-Dist: tf-estimator-nightly.*/Requires-Dist: tensorflow-estimator/" \
+        -e "/Requires-Dist: flatbuffers/d" \
+        -e "/Requires-Dist: gast/d" \
         -e "/Requires-Dist: libclang/d" \
         -e "/Requires-Dist: keras/d" \
+        -e "/Requires-Dist: tensorflow-estimator/d" \
         -e "/Requires-Dist: tensorflow-io-gcs-filesystem/d"
     )
     wheel pack ./unpacked/tensorflow*
+    mv *.whl $orig_name # avoid changes to the _os_arch.whl suffix
 
     popd
   '';
···
   };
 
   meta = with lib; {
-    broken = stdenv.isDarwin;
     description = "Computation using data flow graphs for scalable machine learning";
     homepage = "http://tensorflow.org";
     sourceProvenance = with sourceTypes; [ binaryNativeCode ];

pkgs/development/python-modules/tensorflow/binary-hashes.nix

···
 {
-version = "2.8.0";
+version = "2.9.0";
 linux_py_37_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.8.0-cp37-cp37m-manylinux2010_x86_64.whl";
-  sha256 = "1nza8i0nvqgrcwj2yy74a3wgpgf52svf0yrz9xd6l18gsifkmkx0";
+  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.9.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "1gs10w8hm47lmp4hln8qw02x7c018lxmcxs4i8dj3z5h2k64nx75";
 };
 linux_py_38_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.8.0-cp38-cp38-manylinux2010_x86_64.whl";
-  sha256 = "1li2gllznd5w3hh2w9ibh5lkvvssnwh5vhk7i873dxjjdl1w8sqy";
+  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.9.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "01jz7vsinbzznzh6dv5bcz0yf8v050wd0axpn9z2jakkh5bwskhp";
 };
 linux_py_39_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.8.0-cp39-cp39-manylinux2010_x86_64.whl";
-  sha256 = "03swmyak1hb0k6b2fi9a8g76fi57jz30ym015a576iwp42pqcgkq";
+  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "0458w6p567pm9xs1n5x4z5qygmlwy752d8livvn98p3j0lzccnhy";
 };
 linux_py_310_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.8.0-cp310-cp310-manylinux2010_x86_64.whl";
-  sha256 = "";
+  url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow_cpu-2.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "136d7hjdsks7gvgz54vl9riq1xdqpiamjp449myy9a768vz2xghp";
 };
 linux_py_37_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.8.0-cp37-cp37m-manylinux2010_x86_64.whl";
-  sha256 = "06q3vjrlqfkqa5r18hla3d8ms1sqa897g7fpnqizgh4k8skhm9fq";
+  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.9.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "11w1jrz9x6c8kzqfv14snp9djrwy17qc74h5kdiphhprm9ikkikz";
 };
 linux_py_38_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.8.0-cp38-cp38-manylinux2010_x86_64.whl";
-  sha256 = "0099aa5g19zi74n6bamhmmcgp096m41fhr61swkwnh92myz1ylgb";
+  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.9.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "0vszrrnm706cqqv7b0726dd9ql3pcd08almqk8w0bcfk3fz05d3w";
 };
 linux_py_39_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.8.0-cp39-cp39-manylinux2010_x86_64.whl";
-  sha256 = "0zw20yvlqga7znr13pa10qxww42mj64209syiicgvhs74ji1zdca";
+  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "18mgv36kdpx4q39qm708abfcjxy4gppv9ray0f418q0jlmfy2fi0";
 };
 linux_py_310_gpu = {
-  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.8.0-cp310-cp310-manylinux2010_x86_64.whl";
-  sha256 = "06kwjlhzl46jhjcg836crys2aw39x0g8s1s9qfscm1kbwzbww1hq";
+  url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-2.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl";
+  sha256 = "17wnvfgj9vynq1ibylfqw2cngnjawsxw1mvphdl3g57i92mqsn2x";
 };
 mac_py_37_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.8.0-cp37-cp37m-macosx_10_14_x86_64.whl";
-  sha256 = "1z5w6wx3h45fz0ji9kn2m2kf963bqbvmqc7cyjv4ixymd0rp4jps";
+  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.9.0-cp37-cp37m-macosx_10_14_x86_64.whl";
+  sha256 = "1lvc8rp0a0snjz5cgw6m5nk9qdnl6h7v2cc2pmxssp5c0flqzx4j";
 };
 mac_py_38_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.8.0-cp38-cp38-macosx_10_14_x86_64.whl";
-  sha256 = "1h5v8flhc5zb038ld0av7638cyqqkrib379lrlzvf8dw7q8ry3yx";
+  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.9.0-cp38-cp38-macosx_10_14_x86_64.whl";
+  sha256 = "1lgpgbasmc1av9njz3i1654qkbw2c99x8c7vb2yslnw63s79j774";
 };
 mac_py_39_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.8.0-cp39-cp39-macosx_10_14_x86_64.whl";
-  sha256 = "0qsmlrf8h2gxkimniyrz9bniaqpdsd92pficmsrq30k8rkz2bwjj";
+  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.9.0-cp39-cp39-macosx_10_14_x86_64.whl";
+  sha256 = "07dd3srqx78aq7w0g6k1x6l7zphwhm29lv9ai3gyqszi99cpn5pr";
 };
 mac_py_310_cpu = {
-  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.8.0-cp310-cp310-macosx_10_14_x86_64.whl";
-  sha256 = "0lnwbvil6c6ai10lcaj9ay9pya207s9g204273msjalm1hpbmhvq";
+  url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-2.9.0-cp310-cp310-macosx_10_14_x86_64.whl";
+  sha256 = "14fz1id9clcbcrq4y8i1ij1nrk6dz36cqxb88ilip0jj36vfy991";
 };
 }

pkgs/development/python-modules/tensorflow/prefetcher.sh

···
 #!/usr/bin/env bash
 
-version="2.8.0"
+version="2.9.0"
 
 bucket="https://storage.googleapis.com/tensorflow"
 
···
 # on the following page:
 # https://www.tensorflow.org/install/pip?lang=python3#package-location
 url_and_key_list=(
-"linux_py_37_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp37-cp37m-manylinux2010_x86_64.whl"
-"linux_py_38_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp38-cp38-manylinux2010_x86_64.whl"
-"linux_py_39_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp39-cp39-manylinux2010_x86_64.whl"
-"linux_py_310_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp310-cp310-manylinux2010_x86_64.whl"
-"linux_py_37_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp37-cp37m-manylinux2010_x86_64.whl"
-"linux_py_38_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp38-cp38-manylinux2010_x86_64.whl"
-"linux_py_39_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp39-cp39-manylinux2010_x86_64.whl"
-"linux_py_310_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp310-cp310-manylinux2010_x86_64.whl"
+"linux_py_37_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_38_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_39_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_310_cpu $bucket/linux/cpu/tensorflow_cpu-${version}-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_37_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_38_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_39_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
+"linux_py_310_gpu $bucket/linux/gpu/tensorflow_gpu-${version}-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl"
 "mac_py_37_cpu $bucket/mac/cpu/tensorflow-${version}-cp37-cp37m-macosx_10_14_x86_64.whl"
 "mac_py_38_cpu $bucket/mac/cpu/tensorflow-${version}-cp38-cp38-macosx_10_14_x86_64.whl"
 "mac_py_39_cpu $bucket/mac/cpu/tensorflow-${version}-cp39-cp39-macosx_10_14_x86_64.whl"

pkgs/development/tools/vultr/default.nix

···
-{ lib, buildGoPackage, fetchFromGitHub }:
+{ lib
+, buildGoModule
+, fetchFromGitHub
+}:
 
-buildGoPackage rec {
+buildGoModule rec {
   pname = "vultr";
   version = "2.0.3";
-  goPackagePath = "github.com/JamesClonk/vultr";
 
   src = fetchFromGitHub {
     owner = "JamesClonk";
···
     sha256 = "sha256-kyB6gUbc32NsSDqDy1zVT4HXn0pWxHdBOEBOSaI0Xro=";
   };
 
-  meta = {
-    description = "A command line tool for Vultr services, a provider for cloud virtual private servers";
-    homepage = "https://github.com/JamesClonk/vultr";
-    license = lib.licenses.mit;
-    maintainers = [ lib.maintainers.zauberpony ];
+  vendorSha256 = null;
+
+  # There are not test files
+  doCheck = false;
+
+  meta = with lib; {
+    description = "Vultr CLI and API client library";
+    homepage = "https://jamesclonk.github.io/vultr";
+    changelog = "https://github.com/JamesClonk/vultr/releases/tag/${src.rev}";
+    license = licenses.mit;
+    maintainers = with maintainers; [ zauberpony ];
   };
 }

pkgs/tools/misc/broot/default.nix

···
 
 rustPlatform.buildRustPackage rec {
   pname = "broot";
-  version = "1.13.1";
+  version = "1.13.3";
 
   src = fetchCrate {
     inherit pname version;
-    sha256 = "sha256-mAa6AT8z+U2d6BSqYwnlwqQG7GEF8CgcdZweLBC+Wws=";
+    sha256 = "sha256-OiBmgXGyxEIS7rkRmJbEZdoWPk27j+QD5I+mqJSSxH0=";
   };
 
-  cargoHash = "sha256-y5RRNy+9NPuiD3e62hYQGNQ9tkre9sQ1oCRG1AlcVos=";
+  cargoHash = "sha256-qc68n8bxKuzqnhwS+d33hC4PWZJG1UQMytQUGyJd1bc=";
 
   nativeBuildInputs = [
     installShellFiles

pkgs/tools/misc/direnv/default.nix

···
 
 buildGoModule rec {
   pname = "direnv";
-  version = "2.32.0";
+  version = "2.32.1";
 
   src = fetchFromGitHub {
     owner = "direnv";
     repo = "direnv";
     rev = "v${version}";
-    sha256 = "sha256-VPFN1W49FDzCblmTEq9UR2+j7wL5YIRxwpy6nlxBLfk=";
+    sha256 = "sha256-xweCJtGp+id2ledK5ddoXoKJp57KUvwHuqhrIo8ch8Q=";
   };
 
-  vendorSha256 = "sha256-gFGGnnR1UNT4MYC411X8NwIqVJZqhnmUlVR+XAnrKY8=";
+  vendorSha256 = "sha256-u/LukIOYRudFYOrrlZTMtDAlM3+WjoSBiueR7aySSVU=";
 
   # we have no bash at the moment for windows
   BASH_PATH =

pkgs/top-level/all-packages.nix

···
 
   verifast = callPackage ../applications/science/logic/verifast {};
 
-  veriT = callPackage ../applications/science/logic/verit {};
+  veriT = callPackage ../applications/science/logic/verit {
+    stdenv = gccStdenv;
+  };
 
   why3 = callPackage ../applications/science/logic/why3 { };