pyrox.dev / nixpkgs
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r-modules: prefer gsl 1.x since 2.x is unsupported by r-gsl-1.9.x

Peter Simons 3a8112f7 a1e0894c

+31 -31
unified split
+31 -31
pkgs/development/r-modules/default.nix
··· 221 221 }; 222 222 223 223 packagesWithNativeBuildInputs = { 224 - abn = [ pkgs.gsl ]; 224 + abn = [ pkgs.gsl_1 ]; 225 225 adimpro = [ pkgs.imagemagick ]; 226 226 audio = [ pkgs.portaudio ]; 227 - BayesSAE = [ pkgs.gsl ]; 228 - BayesVarSel = [ pkgs.gsl ]; 227 + BayesSAE = [ pkgs.gsl_1 ]; 228 + BayesVarSel = [ pkgs.gsl_1 ]; 229 229 BayesXsrc = [ pkgs.readline pkgs.ncurses ]; 230 230 bigGP = [ pkgs.openmpi ]; 231 231 BiocCheck = [ pkgs.which ]; 232 232 Biostrings = [ pkgs.zlib ]; 233 - bnpmr = [ pkgs.gsl ]; 234 - BNSP = [ pkgs.gsl ]; 233 + bnpmr = [ pkgs.gsl_1 ]; 234 + BNSP = [ pkgs.gsl_1 ]; 235 235 cairoDevice = [ pkgs.gtk2 ]; 236 236 Cairo = [ pkgs.libtiff pkgs.libjpeg pkgs.cairo ]; 237 237 Cardinal = [ pkgs.which ]; 238 238 chebpol = [ pkgs.fftw ]; 239 239 ChemmineOB = [ pkgs.openbabel pkgs.pkgconfig ]; 240 - cit = [ pkgs.gsl ]; 240 + cit = [ pkgs.gsl_1 ]; 241 241 curl = [ pkgs.curl ]; 242 242 devEMF = [ pkgs.xorg.libXft ]; 243 - diversitree = [ pkgs.gsl pkgs.fftw ]; 243 + diversitree = [ pkgs.gsl_1 pkgs.fftw ]; 244 244 EMCluster = [ pkgs.liblapack ]; 245 245 fftw = [ pkgs.fftw ]; 246 246 fftwtools = [ pkgs.fftw ]; 247 247 Formula = [ pkgs.gmp ]; 248 - geoCount = [ pkgs.gsl ]; 248 + geoCount = [ pkgs.gsl_1 ]; 249 249 git2r = [ pkgs.zlib pkgs.openssl ]; 250 - GLAD = [ pkgs.gsl ]; 250 + GLAD = [ pkgs.gsl_1 ]; 251 251 glpkAPI = [ pkgs.gmp pkgs.glpk ]; 252 252 gmp = [ pkgs.gmp ]; 253 - graphscan = [ pkgs.gsl ]; 254 - gsl = [ pkgs.gsl ]; 255 - HiCseg = [ pkgs.gsl ]; 256 - iBMQ = [ pkgs.gsl ]; 253 + graphscan = [ pkgs.gsl_1 ]; 254 + gsl = [ pkgs.gsl_1 ]; 255 + HiCseg = [ pkgs.gsl_1 ]; 256 + iBMQ = [ pkgs.gsl_1 ]; 257 257 igraph = [ pkgs.gmp ]; 258 258 JavaGD = [ pkgs.jdk ]; 259 259 jpeg = [ pkgs.libjpeg ]; 260 - KFKSDS = [ pkgs.gsl ]; 260 + KFKSDS = [ pkgs.gsl_1 ]; 261 261 kza = [ pkgs.fftw ]; 262 - libamtrack = [ pkgs.gsl ]; 263 - mixcat = [ pkgs.gsl ]; 264 - mvabund = [ pkgs.gsl ]; 262 + libamtrack = [ pkgs.gsl_1 ]; 263 + mixcat = [ pkgs.gsl_1 ]; 264 + mvabund = [ pkgs.gsl_1 ]; 265 265 mwaved = [ pkgs.fftw ]; 266 266 ncdf4 = [ pkgs.netcdf ]; 267 267 ncdf = [ pkgs.netcdf ]; 268 268 nloptr = [ pkgs.nlopt ]; 269 269 openssl = [ pkgs.openssl ]; 270 - outbreaker = [ pkgs.gsl ]; 270 + outbreaker = [ pkgs.gsl_1 ]; 271 271 pander = [ pkgs.pandoc pkgs.which ]; 272 272 pbdMPI = [ pkgs.openmpi ]; 273 273 pbdNCDF4 = [ pkgs.netcdf ]; ··· 278 278 proj4 = [ pkgs.proj ]; 279 279 qtbase = [ pkgs.qt4 ]; 280 280 qtpaint = [ pkgs.qt4 ]; 281 - R2GUESS = [ pkgs.gsl ]; 281 + R2GUESS = [ pkgs.gsl_1 ]; 282 282 R2SWF = [ pkgs.zlib pkgs.libpng pkgs.freetype ]; 283 283 RAppArmor = [ pkgs.libapparmor ]; 284 284 rapportools = [ pkgs.which ]; ··· 286 286 rbamtools = [ pkgs.zlib ]; 287 287 rcdd = [ pkgs.gmp ]; 288 288 RcppCNPy = [ pkgs.zlib ]; 289 - RcppGSL = [ pkgs.gsl ]; 289 + RcppGSL = [ pkgs.gsl_1 ]; 290 290 RcppOctave = [ pkgs.zlib pkgs.bzip2 pkgs.icu pkgs.lzma pkgs.pcre pkgs.octave ]; 291 - RcppZiggurat = [ pkgs.gsl ]; 291 + RcppZiggurat = [ pkgs.gsl_1 ]; 292 292 rgdal = [ pkgs.proj pkgs.gdal ]; 293 293 rgeos = [ pkgs.geos ]; 294 294 rggobi = [ pkgs.ggobi pkgs.gtk2 pkgs.libxml2 ]; ··· 297 297 RGtk2 = [ pkgs.gtk2 ]; 298 298 Rhpc = [ pkgs.zlib pkgs.bzip2 pkgs.icu pkgs.lzma pkgs.openmpi pkgs.pcre ]; 299 299 Rhtslib = [ pkgs.zlib ]; 300 - ridge = [ pkgs.gsl ]; 300 + ridge = [ pkgs.gsl_1 ]; 301 301 RJaCGH = [ pkgs.zlib ]; 302 302 rjags = [ pkgs.jags ]; 303 303 rJava = [ pkgs.zlib pkgs.bzip2 pkgs.icu pkgs.lzma pkgs.pcre pkgs.jdk pkgs.libzip ]; 304 - Rlibeemd = [ pkgs.gsl ]; 304 + Rlibeemd = [ pkgs.gsl_1 ]; 305 305 rmatio = [ pkgs.zlib ]; 306 306 Rmpfr = [ pkgs.gmp pkgs.mpfr ]; 307 307 Rmpi = [ pkgs.openmpi ]; ··· 326 326 SAVE = [ pkgs.zlib pkgs.bzip2 pkgs.icu pkgs.lzma pkgs.pcre ]; 327 327 sdcTable = [ pkgs.gmp pkgs.glpk ]; 328 328 seewave = [ pkgs.fftw pkgs.libsndfile ]; 329 - SemiCompRisks = [ pkgs.gsl ]; 329 + SemiCompRisks = [ pkgs.gsl_1 ]; 330 330 seqinr = [ pkgs.zlib ]; 331 331 seqminer = [ pkgs.zlib pkgs.bzip2 ]; 332 332 showtext = [ pkgs.zlib pkgs.libpng pkgs.icu pkgs.freetype ]; 333 - simplexreg = [ pkgs.gsl ]; 333 + simplexreg = [ pkgs.gsl_1 ]; 334 334 SOD = [ pkgs.cudatoolkit ]; # requres CL/cl.h 335 335 spate = [ pkgs.fftw ]; 336 336 sprint = [ pkgs.openmpi ]; 337 337 ssanv = [ pkgs.proj ]; 338 - stsm = [ pkgs.gsl ]; 338 + stsm = [ pkgs.gsl_1 ]; 339 339 stringi = [ pkgs.icu ]; 340 - survSNP = [ pkgs.gsl ]; 340 + survSNP = [ pkgs.gsl_1 ]; 341 341 sysfonts = [ pkgs.zlib pkgs.libpng pkgs.freetype ]; 342 342 TAQMNGR = [ pkgs.zlib ]; 343 343 tiff = [ pkgs.libtiff ]; 344 - TKF = [ pkgs.gsl ]; 344 + TKF = [ pkgs.gsl_1 ]; 345 345 tkrplot = [ pkgs.xorg.libX11 ]; 346 - topicmodels = [ pkgs.gsl ]; 346 + topicmodels = [ pkgs.gsl_1 ]; 347 347 udunits2 = [ pkgs.udunits pkgs.expat ]; 348 348 V8 = [ pkgs.v8 ]; 349 - VBLPCM = [ pkgs.gsl ]; 350 - VBmix = [ pkgs.gsl pkgs.fftw pkgs.qt4 ]; 349 + VBLPCM = [ pkgs.gsl_1 ]; 350 + VBmix = [ pkgs.gsl_1 pkgs.fftw pkgs.qt4 ]; 351 351 WhopGenome = [ pkgs.zlib ]; 352 352 XBRL = [ pkgs.zlib pkgs.libxml2 ]; 353 353 xml2 = [ pkgs.libxml2 ];