hmmer: enable aarch64 support (#370495)

pkgs/by-name/ea/easel/package.nix

···
+{
+  lib,
+  stdenv,
+  fetchFromGitHub,
+  autoreconfHook,
+  perl,
+  python3,
+  versionCheckHook,
+}:
+
+stdenv.mkDerivation (finalAttrs: {
+  pname = "easel";
+  version = "0.49";
+
+  src = fetchFromGitHub {
+    owner = "EddyRivasLab";
+    repo = "easel";
+    tag = "easel-${finalAttrs.version}";
+    hash = "sha256-NSKy7ptNYR0K/VFJNv+5TGWdC1ZM4Y5i/3L+3Coj/sg=";
+  };
+
+  nativeBuildInputs = [ autoreconfHook ];
+
+  enableParallelBuilding = true;
+
+  doCheck = true;
+
+  nativeCheckInputs = [
+    perl
+    python3
+  ];
+
+  preCheck = ''
+    patchShebangs devkit/sqc
+  '';
+
+  doInstallCheck = true;
+
+  nativeInstallCheckInputs = [ versionCheckHook ];
+
+  meta = {
+    description = "Sequence analysis library used by Eddy/Rivas lab code";
+    homepage = "https://github.com/EddyRivasLab/easel";
+    license = lib.licenses.bsd2;
+    mainProgram = "easel";
+    maintainers = with lib.maintainers; [ natsukium ];
+    platforms = lib.platforms.unix;
+  };
+})

pkgs/by-name/hm/hmmer/package.nix

···
   lib,
   stdenv,
   fetchurl,
+  easel,
+  perl,
+  python3,
+  versionCheckHook,
 }:
 
-stdenv.mkDerivation rec {
+stdenv.mkDerivation (finalAttrs: {
   version = "3.4";
   pname = "hmmer";
 
   src = fetchurl {
-    url = "http://eddylab.org/software/hmmer/${pname}-${version}.tar.gz";
-    sha256 = "sha256-ynDZT9DPJxvXBjQjqrsRbULeUzEXNDqbJ6ZcF/8G+/M=";
+    url = "http://eddylab.org/software/hmmer/hmmer-${finalAttrs.version}.tar.gz";
+    hash = "sha256-ynDZT9DPJxvXBjQjqrsRbULeUzEXNDqbJ6ZcF/8G+/M=";
   };
 
-  meta = with lib; {
+  enableParallelBuilding = true;
+
+  doCheck = true;
+
+  nativeCheckInputs = [
+    perl
+    python3
+  ];
+
+  preCheck = ''
+    install -Dm755 ${easel.src}/devkit/sqc easel/devkit/sqc
+    patchShebangs easel/devkit/sqc testsuite/* src/hmmpress.itest.pl
+  '';
+
+  doInstallCheck = true;
+
+  nativeInstallCheckInputs = [ versionCheckHook ];
+
+  versionCheckProgram = "${placeholder "out"}/bin/hmmalign";
+
+  versionCheckProgramArg = [ "-h" ];
+
+  meta = {
     description = "Biosequence analysis using profile hidden Markov models";
     longDescription = ''
       HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).
···
       HMMER can be downloaded and installed as a command line tool on your own hardware, and now it is also more widely accessible to the scientific community via new search servers at the European Bioinformatics Institute.
     '';
     homepage = "http://hmmer.org/";
-    changelog = "https://github.com/EddyRivasLab/hmmer/blob/hmmer-${version}/release-notes/RELEASE-${version}.md";
-    license = licenses.gpl3;
-    maintainers = [ maintainers.iimog ];
-    # at least SSE is *required*
-    platforms = platforms.x86_64;
+    changelog = "https://github.com/EddyRivasLab/hmmer/blob/hmmer-${finalAttrs.version}/release-notes/RELEASE-${finalAttrs.version}.md";
+    license = lib.licenses.bsd3;
+    maintainers = [ lib.maintainers.iimog ];
+    platforms = lib.platforms.unix;
   };
-}
+})