feat(monopam): add mono=true nested monorepo support and merge mono.lock into sources.toml
Add mono and ref_ fields to sources_registry entries, enabling nested
monorepos (mono=true) with recursive push/pull and replacing mono.lock
with ref pinning in sources.toml. Rename url→source and
default_url_base→origin with full backward compatibility.
Also fix pre-existing syntax errors and formatting in test files.