{ "extraArgs": { "biocVersion": "3.22" }, "packages": { "ALL": { "name": "ALL", "version": "1.52.0", "sha256": "1mjw5wqsip2m85lyb9zxzv68bnp2p0a86lf7h4pmw7wf8675yqfc", "depends": ["Biobase"] }, "ALLMLL": { "name": "ALLMLL", "version": "1.50.0", "sha256": "012ch9yl5j6s7dy086f9643d6gvaqvqpmblvwv2cqrncqvhz980v", "depends": ["affy"] }, "ARRmData": { "name": "ARRmData", "version": "1.46.0", "sha256": "09h68kr79dqi65xbc0wgid2ac8c7958hrnlfsx0ng5w9q2vjqfqs", "depends": [] }, "ASICSdata": { "name": "ASICSdata", "version": "1.30.0", "sha256": "1mr7cxqi68mdnc65d3fq1m02hbyp2shr2j2c60rkcf09saqh7v5h", "depends": [] }, "AWAggregatorData": { "name": "AWAggregatorData", "version": "1.0.0", "sha256": "11sf6i4xhnmijvsvxrm07rddpagn6sd9ykpsz9yxa4f4q4z6wd3p", "depends": ["ExperimentHub"] }, "Affyhgu133A2Expr": { "name": "Affyhgu133A2Expr", "version": "1.46.0", "sha256": "0yl5h630mlcpylfr2gp7i97l2y2gwbz0w0z6sprd3qd2a7bga9sw", "depends": [] }, "Affyhgu133Plus2Expr": { "name": "Affyhgu133Plus2Expr", "version": "1.44.0", "sha256": "0skq48qffh87lrj69fzbvafjijwalp5f5i7y2pna6hszdj42xgm7", "depends": [] }, "Affyhgu133aExpr": { "name": "Affyhgu133aExpr", "version": "1.48.0", "sha256": "1k1m3b86m46vrwb5cas9s38czc8ldgjq5wsjsml3pd5j8l3n2b3z", "depends": [] }, "AffymetrixDataTestFiles": { "name": "AffymetrixDataTestFiles", "version": "0.48.0", "sha256": "04bjwipqjdmmzx5xc950cvzs14sag9a9pcmy6ibywxx2g69sl1xs", "depends": [] }, "Affymoe4302Expr": { "name": "Affymoe4302Expr", "version": "1.48.0", "sha256": "0qz6ln4vxsyv4hg01wdagr6gfdkf1s7amlszdk0adlr7h3c6aqzq", "depends": [] }, "AmpAffyExample": { "name": "AmpAffyExample", "version": "1.50.0", "sha256": "0r6p4hmdy1rqi1ijikygwmr3imcs12djw5y3a2rcpis8ziwwjiyv", "depends": ["affy"] }, "AneuFinderData": { "name": "AneuFinderData", "version": "1.38.0", "sha256": "0k7xj1kb5cdz9j4hnf10kh9qp6hkc2vlsj6z01ybs9g9fski86v7", "depends": [] }, "AshkenazimSonChr21": { "name": "AshkenazimSonChr21", "version": "1.40.0", "sha256": "1s6l9b1xhp0i6fcafwqwg3873v9ajld6s7jr33kr4jwpfca43cl3", "depends": [] }, "AssessORFData": { "name": "AssessORFData", "version": "1.28.0", "sha256": "12889bfg3fgvhch1sr6b3z11cbp08qi5qnsjlckdn98hi4m1fwgp", "depends": ["DECIPHER", "RSQLite"] }, "BeadArrayUseCases": { "name": "BeadArrayUseCases", "version": "1.47.0", "sha256": "0jh4fgz7wl4ihfri27ri5gxwyqmbvi5rfm4rqhsdbgjzc912x00d", "depends": ["GEOquery", "limma"] }, "BeadSorted_Saliva_EPIC": { "name": "BeadSorted.Saliva.EPIC", "version": "1.18.0", "sha256": "1xbry0rdwyhm1xsxv55ppiivsi40yrzd04h5pkb9bdi1rymcwvx4", "depends": ["ExperimentHub", "minfi"] }, "BioImageDbs": { "name": "BioImageDbs", "version": "1.18.0", "sha256": "0l6j1a86qg4vrs0pww16vcp1z86dn79kbqrp4njhpvcwlbwxgsjm", "depends": ["AnnotationHub", "EBImage", "ExperimentHub", "animation", "einsum", "filesstrings", "magick", "magrittr", "markdown", "rmarkdown"] }, "BioPlex": { "name": "BioPlex", "version": "1.15.0", "sha256": "0f6h59s50parzjzrh7pmz0qwrl9zim754azlf5r34w891mdi73c8", "depends": ["BiocFileCache", "GEOquery", "GenomeInfoDb", "GenomicRanges", "SummarizedExperiment", "graph"] }, "BloodCancerMultiOmics2017": { "name": "BloodCancerMultiOmics2017", "version": "1.29.0", "sha256": "19c1xrbz05d4mza5agxscr335fdj39ivjq34kn5sr819v045rl3d", "depends": ["Biobase", "DESeq2", "RColorBrewer", "SummarizedExperiment", "beeswarm", "devtools", "dplyr", "ggdendro", "ggplot2", "glmnet", "gtable", "ipflasso", "reshape2", "scales", "survival", "tibble"] }, "CCl4": { "name": "CCl4", "version": "1.48.0", "sha256": "1hk1cky8w8cs9js46srgjj38x7j67w0a4kqi3i2v62rzi6v9f601", "depends": ["Biobase", "limma"] }, "CENTREprecomputed": { "name": "CENTREprecomputed", "version": "1.0.0", "sha256": "0msldaw5yfrxa836irnmndzivc399x2pjcbzs5bydriphgqln30n", "depends": ["BiocGenerics", "DBI", "ExperimentHub", "RSQLite"] }, "CLL": { "name": "CLL", "version": "1.50.0", "sha256": "1vn11fz1hdny8nznv5bn6q38qjb5hf53r4yxa6mb92dbycxbfm0m", "depends": ["Biobase", "affy"] }, "CLLmethylation": { "name": "CLLmethylation", "version": "1.29.0", "sha256": "140ym427x68fz1kr14k0nvmlk9qxr8q39shgj6cm08d7y5jgnppi", "depends": ["ExperimentHub", "SummarizedExperiment"] }, "COHCAPanno": { "name": "COHCAPanno", "version": "1.46.0", "sha256": "00gfd96bk1m9a0y8ba6ri495iaw0bfa6b335z8n8zgs6bzbjxdgf", "depends": [] }, "CONFESSdata": { "name": "CONFESSdata", "version": "1.38.0", "sha256": "1ywlyc1q51013lmlg5asqs67yngvhbyykzgm3m6yq07b5bcqbq9g", "depends": [] }, "COPDSexualDimorphism_data": { "name": "COPDSexualDimorphism.data", "version": "1.46.0", "sha256": "11rvd7kbgprzbr7ax04s9i5gdfl8yikg5gxz7kf6aj6p1aahkdbq", "depends": [] }, "COSMIC_67": { "name": "COSMIC.67", "version": "1.45.0", "sha256": "1z5v9f6ykfq4grslm3j6mjfkm8pq4dgn9aqlkpwhvpffnh51ja4j", "depends": ["GenomicRanges", "SummarizedExperiment", "VariantAnnotation"] }, "CRCL18": { "name": "CRCL18", "version": "1.29.0", "sha256": "0q38bhqafl29n2g5vxk65gyjajvmjz0ff5mr82y65snzqvdn8hqz", "depends": ["Biobase"] }, "CardinalWorkflows": { "name": "CardinalWorkflows", "version": "1.41.0", "sha256": "18z8akx6031q9cfdsz1kjfi7v36khjw6aklr2xxmmhki04sxrwcr", "depends": ["Cardinal"] }, "CellMapperData": { "name": "CellMapperData", "version": "1.36.0", "sha256": "1jfk300bcx45l8bib6rf9bg2sl6xz37yql2188474nvb30glqkzx", "depends": ["CellMapper", "ExperimentHub"] }, "ChAMPdata": { "name": "ChAMPdata", "version": "2.41.0", "sha256": "0wbw0idzs21zd1a9jn9sfaaah681401mmc8ygp9n4h3jnry1d9j5", "depends": ["BiocGenerics", "GenomicRanges"] }, "ChIPDBData": { "name": "ChIPDBData", "version": "1.0.0", "sha256": "03ii79v6xqv21lp8bzpijnzvyqa1cnv8gij0v4wxpas84f5bnlqv", "depends": ["ExperimentHub"] }, "ChIPXpressData": { "name": "ChIPXpressData", "version": "1.47.0", "sha256": "02j5f58qjrhqrgsknsfxqv59wwh7244aqls2iqwd58in4hglzwkd", "depends": ["bigmemory"] }, "ChIPexoQualExample": { "name": "ChIPexoQualExample", "version": "1.34.0", "sha256": "17kyrrnl47fajdwmdilmmgyzcpc7qr20c7v71c71bqwl5pvf97hs", "depends": [] }, "ChimpHumanBrainData": { "name": "ChimpHumanBrainData", "version": "1.48.0", "sha256": "08z70qr2zxbx27ppp6q4dvjr45zrpkz09jfrf0wcq9q6rrzd2kpw", "depends": ["affy", "hexbin", "limma", "qvalue", "statmod"] }, "CluMSIDdata": { "name": "CluMSIDdata", "version": "1.26.0", "sha256": "1mi9jfzsvq009k5wz1a82pv465n9n8d01jqisq3yf47xjmsnssin", "depends": [] }, "CoSIAdata": { "name": "CoSIAdata", "version": "1.9.1", "sha256": "1k5z9w8j4sr0wx44bcjnnbhjjaf5yrgckyqshl1cmy01h994n0kl", "depends": ["ExperimentHub"] }, "ConnectivityMap": { "name": "ConnectivityMap", "version": "1.45.0", "sha256": "12ln9fdhr42hl8yg2zbx04l6za0dw2cfqr7hjr76zyisrpkx8vpk", "depends": [] }, "CopyNeutralIMA": { "name": "CopyNeutralIMA", "version": "1.27.0", "sha256": "0v5w6aql9nyck288pjdv2dbimmrih0b940p8mi52q89kh28i31dp", "depends": ["ExperimentHub", "Rdpack"] }, "CopyhelpeR": { "name": "CopyhelpeR", "version": "1.42.0", "sha256": "1bnili7srnzapbmy1rh6ql2zmk0y7yzpbmdqbs6rri7wkq03frzf", "depends": [] }, "CytoMethIC": { "name": "CytoMethIC", "version": "1.5.0", "sha256": "1q02bkp8ydvq12c3xdmj6q2s8h7n17gizl3zps1disr72zl5d9jl", "depends": ["BiocManager", "BiocParallel", "ExperimentHub", "sesame", "sesameData"] }, "DAPARdata": { "name": "DAPARdata", "version": "1.39.0", "sha256": "1x1x06jkbb3qks9w3pkqjdwz2g56nn8m84q13v3an222nyi1amp6", "depends": ["MSnbase"] }, "DExMAdata": { "name": "DExMAdata", "version": "1.17.0", "sha256": "1fzgqhsfcq1xkd85nn5gs1nr4mzig1n2mnw6z1pp3giza1jhzg05", "depends": ["Biobase"] }, "DLBCL": { "name": "DLBCL", "version": "1.49.0", "sha256": "1k7mhgybcvihjhhm1vg8aqrqy2jzd9lrnnfw3ylzkjbgamf5gkvx", "depends": ["Biobase", "graph"] }, "DMRcatedata": { "name": "DMRcatedata", "version": "2.27.0", "sha256": "0s8d67drjc1f690q660569dpw38c8fnz4fhbj4i2aazmwvmr87jn", "depends": ["ExperimentHub", "GenomicFeatures", "Gviz", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "plyr", "readxl", "rtracklayer"] }, "DNAZooData": { "name": "DNAZooData", "version": "1.9.0", "sha256": "1wrvmfhcl3i52k9q7gsjrgc7420aq7sn3y43x46w3y9v3dkb4ybh", "depends": ["BiocFileCache", "HiCExperiment", "S4Vectors", "rjson"] }, "DeSousa2013": { "name": "DeSousa2013", "version": "1.45.0", "sha256": "10as3a6ca90ly63b0p09cmcdih4ij8sgbbbiqfkcysh3vhqdrqi6", "depends": ["AnnotationDbi", "Biobase", "ConsensusClusterPlus", "ROCR", "affy", "cluster", "frma", "frmaTools", "gplots", "hgu133plus2_db", "hgu133plus2frmavecs", "pamr", "rgl", "siggenes", "survival", "sva"] }, "DoReMiTra": { "name": "DoReMiTra", "version": "0.99.2", "sha256": "1x1gpz8zf9fridx8sz6y94g74yx0gwbj3kyb631fbz4wljrg7r7a", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "glue", "scater"] }, "DonaPLLP2013": { "name": "DonaPLLP2013", "version": "1.47.0", "sha256": "1waqfil1yjf6d0p8c79h1vhdb420s8yvb7w1d3ajxln7cldar4pb", "depends": ["EBImage"] }, "DropletTestFiles": { "name": "DropletTestFiles", "version": "1.19.0", "sha256": "0a2xd2cdqcxccdd6m319vbrnw2pzw1pa8grkd03lzgrjxy5cgjg6", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors"] }, "DrugVsDiseasedata": { "name": "DrugVsDiseasedata", "version": "1.45.0", "sha256": "0ajhj2xg0i8p6k5nrnicic64ssa5ij55yr9jhrl5rfn4xn2bqa7l", "depends": [] }, "DuoClustering2018": { "name": "DuoClustering2018", "version": "1.27.0", "sha256": "1xirf7x9p13vanix14n2ksjq9h6iqz23i9nwjiy2xzg6c4z3kvp8", "depends": ["ExperimentHub", "dplyr", "ggplot2", "ggthemes", "magrittr", "mclust", "purrr", "reshape2", "tidyr", "viridis"] }, "DvDdata": { "name": "DvDdata", "version": "1.45.0", "sha256": "07iqimnqgyj1ng1n00h46qkjkmhw04hbv83b2jfpkrsswfd37k36", "depends": [] }, "EGSEAdata": { "name": "EGSEAdata", "version": "1.37.0", "sha256": "1za2bpzch7kgmz65wirryrjabvqcvlpln6hf459bw9g8bw6kl7p8", "depends": [] }, "ELMER_data": { "name": "ELMER.data", "version": "2.33.0", "sha256": "0ls5gada9i54iha7qbh5cyj83ic0nk8cjv1ih9clppk0pwqvgjk3", "depends": ["GenomicRanges"] }, "EatonEtAlChIPseq": { "name": "EatonEtAlChIPseq", "version": "0.47.0", "sha256": "01yk4dp2x78rljicnz3fmzkjly6wpnslqx28rcz9z3bia8d52f9f", "depends": ["GenomicRanges", "ShortRead", "rtracklayer"] }, "EpiMix_data": { "name": "EpiMix.data", "version": "1.11.0", "sha256": "08v7wiillr8fzxgb6f8s3h1ipv79khxsnp4m33l71hx2fhymnjl4", "depends": ["ExperimentHub"] }, "EpipwR_data": { "name": "EpipwR.data", "version": "1.3.0", "sha256": "09rlgqw0kykqsinx7jrvvl6v9b8aym4cgq2lmipxgjkpmc0hq40n", "depends": ["ExperimentHub"] }, "FANTOM3and4CAGE": { "name": "FANTOM3and4CAGE", "version": "1.45.0", "sha256": "0z656zmw7561xl9vkdsxrc1vh24c9827yng8d90f5i2zsdjj2ry6", "depends": [] }, "FIs": { "name": "FIs", "version": "1.37.0", "sha256": "1fbv98pilzgx6fjrlyk09pqb79km5260h0wyzhp7ckn3kpygdiy1", "depends": [] }, "FieldEffectCrc": { "name": "FieldEffectCrc", "version": "1.19.0", "sha256": "0qi7lihzh236lpf97l175cnrbg3psbqi97mk87c9drzwwdvwvdxa", "depends": ["AnnotationHub", "BiocStyle", "DESeq2", "ExperimentHub", "RUnit", "SummarizedExperiment"] }, "Fletcher2013a": { "name": "Fletcher2013a", "version": "1.45.0", "sha256": "1ssd8w7w2df7gh1mqbb5fvfx0g0vw666y8dak3jg6szwwryrc3kd", "depends": ["Biobase", "VennDiagram", "gplots", "limma"] }, "Fletcher2013b": { "name": "Fletcher2013b", "version": "1.45.0", "sha256": "1rqr0sbg9iq20y96jiq79dxz26bs91bb63jjp6ghpgcmck4r9wq9", "depends": ["Fletcher2013a", "RColorBrewer", "RTN", "RedeR", "igraph"] }, "FlowSorted_Blood_450k": { "name": "FlowSorted.Blood.450k", "version": "1.47.0", "sha256": "18yqyyy50jmhix26db7867233p8nc96bx6mlp404lj1ml61kh248", "depends": ["minfi"] }, "FlowSorted_Blood_EPIC": { "name": "FlowSorted.Blood.EPIC", "version": "2.13.0", "sha256": "1dhmjrp2cy3g5iajlh0wanq8zdd4ik52k7i9lg5xz36s2w25mqdz", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "genefilter", "minfi", "nlme", "quadprog"] }, "FlowSorted_CordBlood_450k": { "name": "FlowSorted.CordBlood.450k", "version": "1.37.0", "sha256": "1rmc3y8hckyihyklqvlmc210xcl4f4vv7l5qxpkka4nc7wr5jxgg", "depends": ["minfi"] }, "FlowSorted_CordBloodCombined_450k": { "name": "FlowSorted.CordBloodCombined.450k", "version": "1.25.0", "sha256": "0ya53k66vkkb998kagvgb0ga72qg0ym6dbblyxxlfql5bg5pvnyl", "depends": ["AnnotationHub", "ExperimentHub", "IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylationEPICanno_ilm10b4_hg19", "SummarizedExperiment", "minfi"] }, "FlowSorted_CordBloodNorway_450k": { "name": "FlowSorted.CordBloodNorway.450k", "version": "1.35.0", "sha256": "07asqb8589p8x0mmkc3brxxs3bcbv0nkvvnb0fa0igzk73psdmvx", "depends": ["minfi"] }, "FlowSorted_DLPFC_450k": { "name": "FlowSorted.DLPFC.450k", "version": "1.45.0", "sha256": "00xlnpa5faji6cw7aywpvipqsx9i1pyzvlbz17jdslibajzgnry8", "depends": ["minfi"] }, "GIGSEAdata": { "name": "GIGSEAdata", "version": "1.27.0", "sha256": "14cpbksy1d80g86n6bplgh68r7fkl4b2vpwz9clxxjnbc8n7058a", "depends": [] }, "GSBenchMark": { "name": "GSBenchMark", "version": "1.29.0", "sha256": "14yj3zd5155y02gh27m2280ndz57qmk8bbryqwfqhkvysymx652w", "depends": [] }, "GSE103322": { "name": "GSE103322", "version": "1.15.0", "sha256": "157aqvvq0vka4kimmsz28hg67wq79bxkn2b1rwa0shx5x6v4yba8", "depends": ["Biobase", "GEOquery"] }, "GSE13015": { "name": "GSE13015", "version": "1.17.0", "sha256": "1wd77kjcwcfk5z03whv94vwx6qcb5sv430yp9v4pmknblgccw3g9", "depends": ["Biobase", "GEOquery", "SummarizedExperiment", "preprocessCore"] }, "GSE159526": { "name": "GSE159526", "version": "1.15.0", "sha256": "098v3mx2bywhbbk2c93plw44dwiir8cwjz18xgp1bj3l7rvy55i6", "depends": [] }, "GSE62944": { "name": "GSE62944", "version": "1.37.0", "sha256": "049hsn4pxbpsh1k9ivjm9dr2na1szj8pdndllazygcds866aqx9j", "depends": ["Biobase", "GEOquery"] }, "GSVAdata": { "name": "GSVAdata", "version": "1.45.0", "sha256": "1g08i4rlplxkddkjbmrbw9qcwkc4hqizy794gzz9m6jki1qwb82w", "depends": ["Biobase", "GSEABase", "SummarizedExperiment", "hgu95a_db"] }, "GWASdata": { "name": "GWASdata", "version": "1.47.0", "sha256": "1q4psh5xi0ygwbsm9qys79r909dlw3rj9r19fyrp98mxa0w3awyk", "depends": ["GWASTools"] }, "GenomicDistributionsData": { "name": "GenomicDistributionsData", "version": "1.17.0", "sha256": "1j71vfmgl36k8wbj1wpi5i3m36n1804nhx8gj9c3a01ng9jb3q2b", "depends": ["AnnotationFilter", "AnnotationHub", "BSgenome", "ExperimentHub", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "data_table", "ensembldb"] }, "GeuvadisTranscriptExpr": { "name": "GeuvadisTranscriptExpr", "version": "1.37.1", "sha256": "1girvr5amqawqfhcr9fh6gplxvvbnaln7acxzll1rwrpqb1b1g5k", "depends": [] }, "HCAData": { "name": "HCAData", "version": "1.25.0", "sha256": "07ji7g2p7mcxcq9mm5p3dhc0sv291amjsmzkfphg64jfnrsjx8ij", "depends": ["AnnotationHub", "ExperimentHub", "HDF5Array", "SingleCellExperiment"] }, "HCATonsilData": { "name": "HCATonsilData", "version": "1.7.0", "sha256": "0vz0lmq2qbp26dx3k4yjb51scdkrz6bgdmpbpg1anx12cs6prfx5", "depends": ["ExperimentHub", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "base64enc", "htmltools", "rmarkdown"] }, "HD2013SGI": { "name": "HD2013SGI", "version": "1.49.0", "sha256": "02ihg3rqwsm4fssas0h79j4a6g2s824aac5mpny2p785q342kdgk", "depends": ["EBImage", "LSD", "RColorBrewer", "geneplotter", "gplots", "limma", "splots", "vcd"] }, "HDCytoData": { "name": "HDCytoData", "version": "1.29.1", "sha256": "00bgrgzfxw0qx9i55n19vycyjvs6p38v19cb7zc5ivj5np15cq3m", "depends": ["ExperimentHub", "SummarizedExperiment", "flowCore"] }, "HEEBOdata": { "name": "HEEBOdata", "version": "1.47.0", "sha256": "11rbalg9228b2xkx8wrfa3ipi673sxi2sc064wsd349gdvr835ch", "depends": [] }, "HIVcDNAvantWout03": { "name": "HIVcDNAvantWout03", "version": "1.49.0", "sha256": "1n0qkqvs6paw5wqvhcs83d1zbyy5mys7qiqhmnassk7xz3ghql9a", "depends": [] }, "HMP16SData": { "name": "HMP16SData", "version": "1.29.1", "sha256": "14m253awl11vaigf4l5s6sp29hh1h17kri8g0b4cggzgs3n2s7d5", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "assertthat", "dplyr", "kableExtra", "knitr", "magrittr", "readr", "stringr", "tibble"] }, "HMP2Data": { "name": "HMP2Data", "version": "1.23.0", "sha256": "0p0rm1klma3gl0bya5cfavhzpxs0sy7my76nh8nfwch0dci54nxg", "depends": ["AnnotationHub", "ExperimentHub", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "assertthat", "data_table", "dplyr", "kableExtra", "knitr", "magrittr", "phyloseq", "readr"] }, "HSMMSingleCell": { "name": "HSMMSingleCell", "version": "1.29.0", "sha256": "0kgpja68xk28jaql0c0994wj6094zm213rqpwvd2l0g5jfrimya6", "depends": [] }, "HarmanData": { "name": "HarmanData", "version": "1.37.0", "sha256": "0hx3k20s0vhnqkhnznxichd2j4zlljnqybwkv83sakh2x3lklfc0", "depends": [] }, "HarmonizedTCGAData": { "name": "HarmonizedTCGAData", "version": "1.31.0", "sha256": "1zps6hjwv43hryqvq85f15p6w0gall0rv9hp774h8wj7mg69b9p0", "depends": ["ExperimentHub"] }, "HelloRangesData": { "name": "HelloRangesData", "version": "1.35.0", "sha256": "16lq8ygbzcjpg9rxmr8wcqjrhdgkxxjch48xjm42wasy944p821l", "depends": [] }, "HiBED": { "name": "HiBED", "version": "1.7.0", "sha256": "1avpgpbhgffmjy5x64sdka0vgg1mv0939xyan3n8cff88haxymkk", "depends": ["AnnotationHub", "FlowSorted_Blood_EPIC", "FlowSorted_DLPFC_450k", "SummarizedExperiment", "dplyr", "minfi", "tibble"] }, "HiCDataHumanIMR90": { "name": "HiCDataHumanIMR90", "version": "1.29.0", "sha256": "18k5yz60dm2vxlfjbaxhfnm8kg45ljayjr46rdfx09n8j1rfcc0s", "depends": [] }, "HiCDataLymphoblast": { "name": "HiCDataLymphoblast", "version": "1.45.0", "sha256": "0fvq0xl1pcfpa0qji77axkd7bchpi9d4xj7d95x5vgan6djbjqjr", "depends": [] }, "HiContactsData": { "name": "HiContactsData", "version": "1.11.0", "sha256": "0ja7x4chy4d80l8k45qqbq8cj8m67mi0vprg433zijxanaz6f6m5", "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub"] }, "HighlyReplicatedRNASeq": { "name": "HighlyReplicatedRNASeq", "version": "1.21.0", "sha256": "1zp8a7vmfc46kr4bw06wg0k19ih5dg978g8sbi3l5z5vj89fpax6", "depends": ["ExperimentHub", "S4Vectors", "SummarizedExperiment"] }, "Hiiragi2013": { "name": "Hiiragi2013", "version": "1.45.3", "sha256": "0c64456g69hli7h8jdiww3rc0sq7kbhdrkgrh73c1sx82wfgjggx", "depends": ["Biobase", "KEGGREST", "MASS", "RColorBrewer", "affy", "boot", "clue", "cluster", "genefilter", "geneplotter", "gplots", "gtools", "lattice", "latticeExtra", "mouse4302_db", "xtable"] }, "HumanAffyData": { "name": "HumanAffyData", "version": "1.35.0", "sha256": "170z4d1ggjs3iz43p4vcfdsivycd9acg657n2fzj4gyf3hqygcdp", "depends": ["Biobase", "ExperimentHub"] }, "IHWpaper": { "name": "IHWpaper", "version": "1.37.0", "sha256": "0179jy8w48bg2jarh9v4swg76czwxfzakq8z9y0r63x35m7j9y56", "depends": ["Biobase", "BiocGenerics", "BiocParallel", "DESeq2", "IHW", "Rcpp", "SummarizedExperiment", "cowplot", "dplyr", "fdrtool", "genefilter", "ggplot2", "qvalue"] }, "ITALICSData": { "name": "ITALICSData", "version": "2.47.0", "sha256": "09rj6sj8fij5vh03j46ppzx6926w807apd4mi08yviafhlfl4d43", "depends": [] }, "Illumina450ProbeVariants_db": { "name": "Illumina450ProbeVariants.db", "version": "1.45.0", "sha256": "0wcgdas8hdavs3ikph0gxrcyl0q4ga21b2jkci2a40bhv0875kz1", "depends": [] }, "IlluminaDataTestFiles": { "name": "IlluminaDataTestFiles", "version": "1.47.0", "sha256": "0h8dnyk6bf9jv3mzlvl5iw2gc29aq1dys4hyrqxp7q7i2p32ws5g", "depends": [] }, "Iyer517": { "name": "Iyer517", "version": "1.51.0", "sha256": "1srqk2380yqygp9z6y20pwvsq0422aqzfjivsh4xnlqz989hhkz0", "depends": ["Biobase"] }, "JASPAR2014": { "name": "JASPAR2014", "version": "1.45.0", "sha256": "0z3fhdrsfhi8fal966gqw8b0zb7x8j80dw3h34ljgshdhq0wppar", "depends": ["Biostrings"] }, "JASPAR2016": { "name": "JASPAR2016", "version": "1.37.0", "sha256": "19y8f783acilpckwz2a9y7fja1nqysygx6hak9s037x3lcwycj76", "depends": [] }, "JohnsonKinaseData": { "name": "JohnsonKinaseData", "version": "1.5.0", "sha256": "01ff3slhky6al78aq6lxycy03xm19157mq35vlawb553y1g8p2cb", "depends": ["BiocParallel", "ExperimentHub", "checkmate", "dplyr", "purrr", "stringr", "tidyr"] }, "KEGGandMetacoreDzPathwaysGEO": { "name": "KEGGandMetacoreDzPathwaysGEO", "version": "1.29.0", "sha256": "07qsi0hzj858nfmqif147hrcnwly46mglgd3v4bdbm7fnkbyczpg", "depends": ["Biobase", "BiocGenerics"] }, "KEGGdzPathwaysGEO": { "name": "KEGGdzPathwaysGEO", "version": "1.47.0", "sha256": "150b2xrha4c6nbq2byaslfnv4lhdwgnn84gfvaabwss0yx8i54qm", "depends": ["Biobase", "BiocGenerics"] }, "KOdata": { "name": "KOdata", "version": "1.35.0", "sha256": "1kivbjzkal2drcqf2nri3nazdi23l4gcz7kcrlscw52bzn94n169", "depends": [] }, "LRcellTypeMarkers": { "name": "LRcellTypeMarkers", "version": "1.17.0", "sha256": "04rlx37xxmjrffpq7n3xy2m2znvqp5n18m42499hbfsyazy0bjah", "depends": ["ExperimentHub"] }, "LegATo": { "name": "LegATo", "version": "1.3.0", "sha256": "0pjr6g157f4bmphfmg4196rsxyyrp1g8kzr8f27jjwv4kqjwky4m", "depends": ["MultiAssayExperiment", "S4Vectors", "SummarizedExperiment", "animalcules", "data_table", "dplyr", "ggplot2", "magrittr", "plyr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "LiebermanAidenHiC2009": { "name": "LiebermanAidenHiC2009", "version": "0.47.0", "sha256": "19fdshnrch7ll1rgz1z54gjsm6lr3cyzi0m6sjv0nxnhzwcfdjfz", "depends": ["IRanges", "KernSmooth"] }, "ListerEtAlBSseq": { "name": "ListerEtAlBSseq", "version": "1.41.0", "sha256": "1dxqiaz0vchckdxss2b1k0vp2f7qyn2x07ryh6b77b10vfy72y50", "depends": ["methylPipe"] }, "LungCancerACvsSCCGEO": { "name": "LungCancerACvsSCCGEO", "version": "1.45.0", "sha256": "0f2jqj8k3ahxpidsq1d3xizyx5njv9a40ydapfmwmhl102a4p2i6", "depends": [] }, "LungCancerLines": { "name": "LungCancerLines", "version": "0.47.0", "sha256": "1qmhnip8lq66vziqbs9plda2pvz1fm9jz2m2zv4q68a6hsfk5zww", "depends": ["Rsamtools"] }, "M3DExampleData": { "name": "M3DExampleData", "version": "1.35.0", "sha256": "152cra85gkwkc11z6w05fkc9walcjvxkqhs864qvklzpzp18kn08", "depends": [] }, "MACSdata": { "name": "MACSdata", "version": "1.17.0", "sha256": "085mdncwb3chrsrlqv1k1x2w04f67lm9xm3qimsw3yvdxs6whvis", "depends": [] }, "MAQCsubset": { "name": "MAQCsubset", "version": "1.47.0", "sha256": "1918sj7ixk2546kms1npbccadq6ybmwjscx93y6w4srr3py1iqhv", "depends": ["Biobase", "affy", "lumi"] }, "MEDIPSData": { "name": "MEDIPSData", "version": "1.45.1", "sha256": "0c8fa8lx1v9ggiw3j1l9n6bj9552qbpjgzzr1jwil8b188r39ybk", "depends": [] }, "MEEBOdata": { "name": "MEEBOdata", "version": "1.47.0", "sha256": "0hndj1m222xwlfgfpplff2c47lk43lcdw13jcd7scsm9ngcdq0gv", "depends": [] }, "MMDiffBamSubset": { "name": "MMDiffBamSubset", "version": "1.45.0", "sha256": "0yfgad3smlm809bclvvaf2lwsznc9495gc07m49mxk5m8j48pzq7", "depends": [] }, "MOFAdata": { "name": "MOFAdata", "version": "1.25.0", "sha256": "1wwb8fa7iy5wz8qflc8aqd1py9i02qphkiw2kmbdsfclm2g5ppdd", "depends": [] }, "MSMB": { "name": "MSMB", "version": "1.27.0", "sha256": "1p9lh5g8ampk1fqnl1hqqxbhc6l1c45ifs81qg27x39syz1xz5pb", "depends": ["tibble"] }, "MUGAExampleData": { "name": "MUGAExampleData", "version": "1.29.0", "sha256": "1slwb2dbiblpiy5h2nksdy729zb19xmfvlxjqh2ai7cp5rqdvcj7", "depends": [] }, "MerfishData": { "name": "MerfishData", "version": "1.11.1", "sha256": "0k7ysl3yba931m99fqcllvr4cqaxd5nsb0qyxgm1d1f20c4bdwl5", "depends": ["AnnotationHub", "BumpyMatrix", "EBImage", "ExperimentHub", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] }, "MetaGxBreast": { "name": "MetaGxBreast", "version": "1.29.0", "sha256": "1cfzrz75hvyyrc802y7jfh9clbyj6jsbf99bklnvdaf91yng85wb", "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "SummarizedExperiment", "impute", "lattice"] }, "MetaGxPancreas": { "name": "MetaGxPancreas", "version": "1.29.0", "sha256": "15d0l5rnsw6qcgg21fas4za1r7sp7mzxh9i0ry25b0bg2wgjlsi7", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "impute"] }, "MetaScope": { "name": "MetaScope", "version": "1.9.10", "sha256": "1w744n0k6pcj35nhxginfw2h6zjmhkr8kgp9m4yrvlr74219zds3", "depends": ["BiocFileCache", "Biostrings", "Matrix", "MultiAssayExperiment", "Rbowtie2", "Rsamtools", "S4Vectors", "SummarizedExperiment", "data_table", "dplyr", "ggplot2", "magrittr", "readr", "rlang", "stringr", "taxonomizr", "tibble", "tidyr"] }, "MethylAidData": { "name": "MethylAidData", "version": "1.41.0", "sha256": "1zdbyzrchnavllphr79b58jkgrlaqc5grgnqqkwql11a1nvmc9bj", "depends": ["MethylAid"] }, "MethylSeqData": { "name": "MethylSeqData", "version": "1.19.0", "sha256": "0ddqmr1h5kcaimknxqryvy3mvj6j4jmzq9i9y6jry4578njpp549", "depends": ["ExperimentHub", "GenomeInfoDb", "GenomicRanges", "HDF5Array", "IRanges", "S4Vectors", "SummarizedExperiment", "rhdf5"] }, "MicrobiomeBenchmarkData": { "name": "MicrobiomeBenchmarkData", "version": "1.11.0", "sha256": "03zi9i34a7xyfhb1cgyfyc91vs2ylcp3jk7wv0mksqcb99ajmggn", "depends": ["BiocFileCache", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "ape"] }, "MouseAgingData": { "name": "MouseAgingData", "version": "1.5.0", "sha256": "0vh1yan2zl8mh65wlk4zln6f8mknr5vyqgd96qg20z06v6qymn62", "depends": ["AnnotationHub", "ExperimentHub", "SingleCellExperiment"] }, "MouseGastrulationData": { "name": "MouseGastrulationData", "version": "1.23.0", "sha256": "0dwgbyhm99grf1hkr3b502fqh662k3a2zk2r73yy557i5r6gbiwc", "depends": ["BiocGenerics", "BumpyMatrix", "ExperimentHub", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] }, "MouseThymusAgeing": { "name": "MouseThymusAgeing", "version": "1.17.0", "sha256": "0138fwh04bzzgc31c7gy2a1l3n4z30g74vy1j0mi9f85gxfqjm97", "depends": ["BiocGenerics", "ExperimentHub", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment"] }, "NCIgraphData": { "name": "NCIgraphData", "version": "1.45.0", "sha256": "1365k5xd0fai3sq08n3mpggswkahfkqvkjhk2xzwz86q8fm7m8jw", "depends": [] }, "NGScopyData": { "name": "NGScopyData", "version": "1.29.0", "sha256": "102dfgaigm6vwp92bfddnxbfnsjrg6k1frgfyisdr9hkdc4na0dz", "depends": [] }, "NanoporeRNASeq": { "name": "NanoporeRNASeq", "version": "1.19.0", "sha256": "1rqysbyam34piinqbrh1hafrdgar7g5ar16455zaskiwsdfn8i14", "depends": ["ExperimentHub"] }, "NestLink": { "name": "NestLink", "version": "1.25.0", "sha256": "1b917571gdzxxakqsxx3pzmln7iiaxcnbqgq15g55lmzbnn3b5gk", "depends": ["AnnotationHub", "Biostrings", "ExperimentHub", "ShortRead", "gplots", "protViz"] }, "NetActivityData": { "name": "NetActivityData", "version": "1.11.0", "sha256": "01b8fg4wap0dqc46l9dji6xbr6xqjv1mc4ykm0z3qrci0mifsspz", "depends": [] }, "Neve2006": { "name": "Neve2006", "version": "0.47.0", "sha256": "1mcmwwzvy024a3a8jrsgf7ymylvn3ihy2mnakz2qax9nwpps27qq", "depends": ["Biobase", "annotate", "hgu133a_db"] }, "NxtIRFdata": { "name": "NxtIRFdata", "version": "1.15.0", "sha256": "0sr14bhrmzfm4jvgsny6p82aln0jx7g7xz5yxd88pyxq9wk0k21s", "depends": ["BiocFileCache", "ExperimentHub", "R_utils", "rtracklayer"] }, "OMICsPCAdata": { "name": "OMICsPCAdata", "version": "1.27.0", "sha256": "1jc97qqv66y2la9ixpacr7pg29sxgxy2prqz2rd3vf2l5413g249", "depends": ["MultiAssayExperiment"] }, "ObMiTi": { "name": "ObMiTi", "version": "1.17.0", "sha256": "05pgj03cq5b9d0npw5ghv7wzpigbag1qc9q58w5wv21ny21zxmcc", "depends": ["ExperimentHub", "SummarizedExperiment"] }, "OnassisJavaLibs": { "name": "OnassisJavaLibs", "version": "1.31.0", "sha256": "112lkxgb0d0i7i7blajkdahxs4r6w1gik178nkllh1hmr8jbp8lq", "depends": ["rJava"] }, "PCHiCdata": { "name": "PCHiCdata", "version": "1.37.0", "sha256": "18dyj4i7wh532425gv0g7hsv958i7vlz5kz6cngz20jhhyqg69g9", "depends": ["Chicago"] }, "PREDAsampledata": { "name": "PREDAsampledata", "version": "0.49.0", "sha256": "13kaf8wq6h41sqj52lz2d1py9a4v40vk9c1lsqy4h7ykbzn2jwk8", "depends": ["Biobase", "PREDA", "affy", "annotate"] }, "PWMEnrich_Dmelanogaster_background": { "name": "PWMEnrich.Dmelanogaster.background", "version": "4.43.0", "sha256": "0yhif7qd6w3bkcwjlqqpzhszjcpgj37saay62ckmqhvzvs715flx", "depends": ["PWMEnrich"] }, "PWMEnrich_Hsapiens_background": { "name": "PWMEnrich.Hsapiens.background", "version": "4.43.0", "sha256": "1bd6vy52glr37iv42mx7m9z74y4wfa7sdg6m1ghngnv7arj9306l", "depends": ["PWMEnrich"] }, "PWMEnrich_Mmusculus_background": { "name": "PWMEnrich.Mmusculus.background", "version": "4.43.0", "sha256": "1f2ihqyinychw6q39km3b304syg1wyfkl1aa8ga8c0j70h9zw98w", "depends": ["PWMEnrich"] }, "PasillaTranscriptExpr": { "name": "PasillaTranscriptExpr", "version": "1.37.0", "sha256": "18zp6f8l4463krhlvmr7h2xxzdkqa1967n74vnl8i2z05zlhlwpa", "depends": [] }, "PathNetData": { "name": "PathNetData", "version": "1.45.0", "sha256": "1swkinid0kmpj342i875zdy51zgfc1nxcymqj0lydsf1g2v3jaxj", "depends": [] }, "PepsNMRData": { "name": "PepsNMRData", "version": "1.27.0", "sha256": "01k0iisb983vvm4kcfbbvhxccgvf7rxmqx3b67m4zb82b8z3r7ci", "depends": [] }, "PhyloProfileData": { "name": "PhyloProfileData", "version": "1.23.3", "sha256": "1wkyl5yk36599wb9bg6dpx0sil9jagrwzcakyd8fy8wa6b0h278j", "depends": ["BiocStyle", "Biostrings", "ExperimentHub"] }, "ProData": { "name": "ProData", "version": "1.47.0", "sha256": "03w7pdqm8vv7wh9vz2b65vi6ibzbdqb69vc1k4npp9rjqlfnfrjk", "depends": ["Biobase"] }, "ProteinGymR": { "name": "ProteinGymR", "version": "1.3.12", "sha256": "1f7g1fzmkn6krlix3wxby12w32glv38inr29x3mmnr11cpsylx6a", "depends": ["AnnotationHub", "ExperimentHub", "dplyr", "htmltools", "lifecycle", "purrr", "queryup", "rlang", "spdl", "stringr", "tidyr", "tidyselect"] }, "PtH2O2lipids": { "name": "PtH2O2lipids", "version": "1.35.0", "sha256": "1c6l08w7b6n6ck57vks0ka907xk4apiv2ya7ics0372xpvq2l0b2", "depends": ["CAMERA", "LOBSTAHS", "xcms"] }, "QDNAseq_hg19": { "name": "QDNAseq.hg19", "version": "1.39.0", "sha256": "1nzhjspif60zdijfvz5iimqmx4kc50l6bq4iq0yyybc053w7k5r3", "depends": ["QDNAseq"] }, "QDNAseq_mm10": { "name": "QDNAseq.mm10", "version": "1.39.0", "sha256": "0nr4j6b74iljx2kmcrlmkswj5bhdqhzkzk1kqlkxizkwwgx24031", "depends": ["QDNAseq"] }, "QUBICdata": { "name": "QUBICdata", "version": "1.37.0", "sha256": "1c7dvrd282nhhxhahxnvjxsf55jq0l8axxj25yi610gd31qqhppq", "depends": [] }, "RGMQLlib": { "name": "RGMQLlib", "version": "1.29.1", "sha256": "0q1zyksjwsq2q8na2g83w0lf51dnwfr824f52xjmf8i4ans33k39", "depends": [] }, "RITANdata": { "name": "RITANdata", "version": "1.33.0", "sha256": "0ppbzpdjpr7gdh9riimf4x54ry8lk4fhvkzaghdpv8gas7jgb1sq", "depends": [] }, "RMassBankData": { "name": "RMassBankData", "version": "1.47.0", "sha256": "0dp4ywz00nxwwz2kc2winjsw3p0hp47h3lyik9wisj2jbn7j26xx", "depends": [] }, "RNAmodR_Data": { "name": "RNAmodR.Data", "version": "1.23.0", "sha256": "10vqdazffpf97b2csbgljd3bd27f6mp44gcgm6rj2p1rnpn2vzdg", "depends": ["ExperimentHub", "ExperimentHubData"] }, "RNAseqData_HNRNPC_bam_chr14": { "name": "RNAseqData.HNRNPC.bam.chr14", "version": "0.47.0", "sha256": "1s1w71pandb3ysm1h4mf8468slq0xvbwn16a8x3p3z4gfdcrg628", "depends": [] }, "RRBSdata": { "name": "RRBSdata", "version": "1.29.0", "sha256": "0h9mp14fkh00k53nxig4g89g8qnp452a6adw445y155kb8dpaydb", "depends": ["BiSeq"] }, "RTCGA_CNV": { "name": "RTCGA.CNV", "version": "1.37.0", "sha256": "1z78nlwqvcvgsc97a240gf14arhin82l3dl68yzpglcy4rjjwv6a", "depends": ["RTCGA"] }, "RTCGA_PANCAN12": { "name": "RTCGA.PANCAN12", "version": "1.37.0", "sha256": "19djsrqhif46z4vmjcyslrrfk29f04g6m4y50wx83gfi4g59nick", "depends": ["RTCGA"] }, "RTCGA_RPPA": { "name": "RTCGA.RPPA", "version": "1.37.0", "sha256": "03hpgz5ijv38llz8fq5rks0a7h0c0c8am1nky4b6ycq12y6fm7qi", "depends": ["RTCGA"] }, "RTCGA_clinical": { "name": "RTCGA.clinical", "version": "20151101.39.0", "sha256": "0cpxmghc9r2s9rm1g09inv4b06c7naln6c7sp07kmad0l26qwvd2", "depends": ["RTCGA"] }, "RTCGA_mRNA": { "name": "RTCGA.mRNA", "version": "1.37.0", "sha256": "0zn9axyk6183j24mblk26xx4jnvir8qpscq4f1fxzf8p4147bc9k", "depends": ["RTCGA"] }, "RTCGA_methylation": { "name": "RTCGA.methylation", "version": "1.37.0", "sha256": "0mhasmy0xsra8yb4jwgsvpxjd69n5db0n88s6vaspix99i2xmr4p", "depends": ["RTCGA"] }, "RTCGA_miRNASeq": { "name": "RTCGA.miRNASeq", "version": "1.37.0", "sha256": "1bdm34acz37q88dcs0161fnn509f020km4isjppp7ig5xr8dazpf", "depends": ["RTCGA"] }, "RTCGA_mutations": { "name": "RTCGA.mutations", "version": "20151101.39.0", "sha256": "0vxna3x9yzywycrqa2x4ghgj1fsy71dlq0kyl8c31slynpxxmz19", "depends": ["RTCGA"] }, "RTCGA_rnaseq": { "name": "RTCGA.rnaseq", "version": "20151101.39.0", "sha256": "1mnhwrx1m8ynsqwla1k6cynnj5dkai5z2p36pb5llkxa5fwihy9b", "depends": ["RTCGA"] }, "RUVnormalizeData": { "name": "RUVnormalizeData", "version": "1.29.0", "sha256": "02af05c8jxmnv9h3acxjg1abxf2msvbvj8lrfffh43xyc0xjqyjb", "depends": ["Biobase"] }, "RcisTarget_hg19_motifDBs_cisbpOnly_500bp": { "name": "RcisTarget.hg19.motifDBs.cisbpOnly.500bp", "version": "1.29.0", "sha256": "1zgr19m2jvjzrjv7n022adgvc8qpdky3xxhbkwrv8qzw0xdyq1wi", "depends": ["data_table"] }, "ReactomeGSA_data": { "name": "ReactomeGSA.data", "version": "1.23.0", "sha256": "1nqxrr74w40rpns6js3zhxf2ndmnrm1mm8r6x8aaf544qpgbxaxw", "depends": ["ReactomeGSA", "Seurat", "edgeR", "limma"] }, "RegParallel": { "name": "RegParallel", "version": "1.27.0", "sha256": "0hv0rd6z8k0qykz4fnbz281xa1mywfhw1q326p3ag14jjbs74prr", "depends": ["arm", "data_table", "doParallel", "foreach", "iterators", "stringr", "survival"] }, "RforProteomics": { "name": "RforProteomics", "version": "1.47.2", "sha256": "15002fk6na5nxng585cgl77nj651j3drzjprcyvl0rmqg60jh30d", "depends": ["BiocManager", "MSnbase", "R_utils", "biocViews"] }, "RnBeads_hg19": { "name": "RnBeads.hg19", "version": "1.41.0", "sha256": "1v3nd2l74l6211vk5ylvkmi4pbvhw4ibj0mdmwjcj6srimh5hkii", "depends": ["GenomicRanges"] }, "RnBeads_hg38": { "name": "RnBeads.hg38", "version": "1.41.1", "sha256": "16grm8gr4mslj1424hfnlm43j33f1z3qf1i2igkfhphyfn1j551f", "depends": ["GenomicRanges"] }, "RnBeads_mm10": { "name": "RnBeads.mm10", "version": "2.17.0", "sha256": "0n3vld4ra6b9xipa698ndr80ma5hm4rv7hgiphgzz6k6vlri65v0", "depends": ["GenomicRanges"] }, "RnBeads_mm9": { "name": "RnBeads.mm9", "version": "1.41.0", "sha256": "1844vysnwb9sc1ynaszh00272cbzxn578lrd4inxnvwrv5s9zl0h", "depends": ["GenomicRanges"] }, "RnBeads_rn5": { "name": "RnBeads.rn5", "version": "1.41.0", "sha256": "1aa37n6yxga5gsv7ipnc244ky96y0h8sj8s2x0d08fnsqjnndp2h", "depends": ["GenomicRanges"] }, "RnaSeqSampleSizeData": { "name": "RnaSeqSampleSizeData", "version": "1.41.0", "sha256": "0263wwai0fpwdz6xaa0z5ybbcpzanky40wlyccyz1ng519gnyzvj", "depends": ["edgeR"] }, "SBGNview_data": { "name": "SBGNview.data", "version": "1.23.0", "sha256": "0i2pv99mr3wqwzbdhsqmqy4sjkvdjjx33ndmizaqsimnhgsxdr3m", "depends": ["bookdown", "knitr", "rmarkdown"] }, "SCLCBam": { "name": "SCLCBam", "version": "1.41.0", "sha256": "0ffd2ji8m1q25yvmv3928g3wvcwvl4x4981l8q4bhlm4h47h5gix", "depends": [] }, "SFEData": { "name": "SFEData", "version": "1.11.0", "sha256": "0y5irwxs6hj2ibz947x294j3gggsv27rx68c6473d9f8jmqca1bk", "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub"] }, "SNAData": { "name": "SNAData", "version": "1.55.0", "sha256": "063bsbnhay889l1rhjzfsazmcl0653ns9qifhxhk6ffcdizkdaav", "depends": ["graph"] }, "SNAGEEdata": { "name": "SNAGEEdata", "version": "1.45.0", "sha256": "0r62y9l1mv4f2xllw48v36aimai17k0npfa78xwyvg4f2441dk20", "depends": [] }, "SNPhoodData": { "name": "SNPhoodData", "version": "1.39.0", "sha256": "17wxcdcq3ms2p7ly8i1fsh9vx6bgsl1q3sxnn4zqs697j0rg1abb", "depends": [] }, "STexampleData": { "name": "STexampleData", "version": "1.17.1", "sha256": "0mbpbmz90s1cmgzlr539fzx86pbci34i3kn1gsbx1fvidx8l6vld", "depends": ["ExperimentHub", "SingleCellExperiment", "SpatialExperiment"] }, "SVM2CRMdata": { "name": "SVM2CRMdata", "version": "1.41.0", "sha256": "17q6cap77f4smn5p6nlp9p8hh6lin1mrrkwa74q33d7q28hpclpl", "depends": [] }, "SimBenchData": { "name": "SimBenchData", "version": "1.17.0", "sha256": "1kxmx2dmxvcdpb6gqph9lvjqcj71zr6lsx9nspd7jmp6fmlncvvc", "depends": ["ExperimentHub", "S4Vectors"] }, "Single_mTEC_Transcriptomes": { "name": "Single.mTEC.Transcriptomes", "version": "1.37.1", "sha256": "0ca0ywb1dcv9ks5kf182gd2mpkfdnvzkq86xrc35cwx051c30b50", "depends": [] }, "SingleCellMultiModal": { "name": "SingleCellMultiModal", "version": "1.21.4", "sha256": "0zxy8lqy0jlclcvj9azn3p1cnkjrl817ichp6y9qnj4w6inc7x9y", "depends": ["AnnotationHub", "BiocBaseUtils", "BiocFileCache", "ExperimentHub", "HDF5Array", "Matrix", "MultiAssayExperiment", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment"] }, "SingleMoleculeFootprintingData": { "name": "SingleMoleculeFootprintingData", "version": "1.17.0", "sha256": "03gvxyr7lcclk6slz0kqp30yqyyvfd18x2m0sdivdzp5x8dqibdg", "depends": ["ExperimentHub"] }, "SomatiCAData": { "name": "SomatiCAData", "version": "1.47.0", "sha256": "0k2djw40r6hdm87p8bd2y5ff0m5wzm9gggw5abzxm75myjwg7l70", "depends": [] }, "SomaticCancerAlterations": { "name": "SomaticCancerAlterations", "version": "1.45.0", "sha256": "05mixv2ch4x8yvfikrgibalrvghkm2sd509fqpj99qrsmq2ivvxv", "depends": ["GenomicRanges", "IRanges", "S4Vectors"] }, "SpatialDatasets": { "name": "SpatialDatasets", "version": "1.7.3", "sha256": "016m0q2rnsk4kmnkpwaajaw0kh4z4q4k3ldhijqsqdm9grw88gk9", "depends": ["ExperimentHub", "SpatialExperiment"] }, "SpikeIn": { "name": "SpikeIn", "version": "1.51.0", "sha256": "01631wlgdjbi9kiq0c8ph6br0glzqg9l9hy4q85pslpi0ylg20pi", "depends": ["affy"] }, "SpikeInSubset": { "name": "SpikeInSubset", "version": "1.49.0", "sha256": "0d21cs5mzfn4c8gc6268r87phm566w0m28kvqv9wrs38r309sn38", "depends": ["Biobase", "affy"] }, "SubcellularSpatialData": { "name": "SubcellularSpatialData", "version": "1.5.0", "sha256": "08wij5x2am8c5z6dlzym3ndxv93m84yjcwb4i3qa2ls596gp6j9g", "depends": ["Matrix", "SpatialExperiment", "dplyr", "hexbin"] }, "TBX20BamSubset": { "name": "TBX20BamSubset", "version": "1.45.0", "sha256": "0va7xl0fs7jffy35b2j4diwg9pav2d7wcm55lvx92l8zik743xbq", "depends": ["Rsamtools", "xtable"] }, "TCGAMethylation450k": { "name": "TCGAMethylation450k", "version": "1.45.0", "sha256": "070aa6mpyh0h5wp4qbc1n1gziiiyb9yd36rri9193rka8d8323w6", "depends": [] }, "TCGAWorkflowData": { "name": "TCGAWorkflowData", "version": "1.33.0", "sha256": "1d88x6nw6s6fi0kqac7r50j64k821ndhzbmwjqq275n5lknlpq7n", "depends": ["SummarizedExperiment"] }, "TCGAbiolinksGUI_data": { "name": "TCGAbiolinksGUI.data", "version": "1.30.0", "sha256": "0pb16qz7a3dn89bibg9l2jnyb5xr7h5ndj5s31nskx2y5fwxrxf3", "depends": [] }, "TCGAcrcmRNA": { "name": "TCGAcrcmRNA", "version": "1.29.0", "sha256": "02kqhm5i831dvcgcz1x5cv7w0bnc29v0irslh2xjkpcxhfqcr7a8", "depends": ["Biobase"] }, "TCGAcrcmiRNA": { "name": "TCGAcrcmiRNA", "version": "1.29.0", "sha256": "1rrnhwqci7zda6ix3wjapmgyz3pjry8xraa82iilvs0qn86zkbi3", "depends": ["Biobase"] }, "TENET_ExperimentHub": { "name": "TENET.ExperimentHub", "version": "1.1.2", "sha256": "0yxwhm5f9a0290ip869p47iy3d7800b17kjg18acqqiq9gbpkpiq", "depends": ["ExperimentHub", "GenomicRanges", "MultiAssayExperiment", "SummarizedExperiment", "ggplot2"] }, "TENxBUSData": { "name": "TENxBUSData", "version": "1.23.0", "sha256": "1v316jd03wvpfqcg6zs8w96m3c6l9iqj2mcqmi1jlqrdy5xifkq0", "depends": ["AnnotationHub", "BiocGenerics", "ExperimentHub"] }, "TENxBrainData": { "name": "TENxBrainData", "version": "1.29.0", "sha256": "02jy1m8v95fs4hk2gqma1vjkdhlq6p66nlr2p6234zjrv57cwvv6", "depends": ["AnnotationHub", "ExperimentHub", "HDF5Array", "SingleCellExperiment"] }, "TENxPBMCData": { "name": "TENxPBMCData", "version": "1.27.0", "sha256": "14zhrbs8zhgx8bri0rz2asz5sx3j3rm4vg4vshbpdhjnmyshm31m", "depends": ["AnnotationHub", "ExperimentHub", "HDF5Array", "SingleCellExperiment"] }, "TENxVisiumData": { "name": "TENxVisiumData", "version": "1.17.0", "sha256": "10lwphvwdh5nh4dqzkrpv6rvw9mm52v3d6xjr305kiaqg0pdlq7x", "depends": ["ExperimentHub", "SpatialExperiment"] }, "TENxXeniumData": { "name": "TENxXeniumData", "version": "1.5.0", "sha256": "0z7pvyii5r57sh33xry0q27phlxqcg3jw8q13l14flay5kf64hnw", "depends": ["BumpyMatrix", "ExperimentHub", "SpatialExperiment", "SpatialFeatureExperiment", "SummarizedExperiment"] }, "TMExplorer": { "name": "TMExplorer", "version": "1.19.0", "sha256": "0116rqn0l1hi14bcm6hgz7zysdc3cyxfjgp0h7lv5s3pnsy17l2q", "depends": ["BiocFileCache", "Matrix", "SingleCellExperiment"] }, "TabulaMurisData": { "name": "TabulaMurisData", "version": "1.27.0", "sha256": "0p08phsmb8658y23rmm6lr3rsp4l1dpjiqrlksc1q8is73rh6863", "depends": ["ExperimentHub"] }, "TabulaMurisSenisData": { "name": "TabulaMurisSenisData", "version": "1.15.1", "sha256": "1qa5i6y4j0vckxrhmbpphxsb3ps8ynn1gv2j1g7qp31b7n697y9r", "depends": ["AnnotationHub", "ExperimentHub", "HDF5Array", "SingleCellExperiment", "SummarizedExperiment", "gdata"] }, "TargetScoreData": { "name": "TargetScoreData", "version": "1.45.0", "sha256": "1rsk1a5dzl7xk5kjf22jji4g5f3689lqi3fdf8a1iz8792k2469k", "depends": [] }, "TargetSearchData": { "name": "TargetSearchData", "version": "1.47.0", "sha256": "18jrw1rxm9hhdsv3z24jl75py3iac3vb401nld7lby26jy66915d", "depends": [] }, "TimerQuant": { "name": "TimerQuant", "version": "1.39.0", "sha256": "071x0kkn7963mfrgpq2zrxa1hznyzcyjy33cracj6ifnh92jd1x0", "depends": ["deSolve", "dplyr", "ggplot2", "gridExtra", "locfit", "shiny"] }, "TransOmicsData": { "name": "TransOmicsData", "version": "1.5.0", "sha256": "1r00dbycihmfc5snamx3jnw49k1hrh961m7w2a57zpqh695q3awn", "depends": ["S4Vectors"] }, "TumourMethData": { "name": "TumourMethData", "version": "1.7.1", "sha256": "0k9izn7sncnsavwlzcb7qyhmga68cxxwpvh252vzn2yz0i9wisgn", "depends": ["ExperimentHub", "GenomicRanges", "HDF5Array", "R_utils", "SummarizedExperiment", "rhdf5"] }, "VariantToolsData": { "name": "VariantToolsData", "version": "1.33.0", "sha256": "0m0yfs2pvplw3h3fzr8c0yqwjm1s8cdi6h8bc1x6wq3zh1b6sxf0", "depends": ["BiocGenerics", "GenomicRanges", "VariantAnnotation"] }, "VectraPolarisData": { "name": "VectraPolarisData", "version": "1.13.0", "sha256": "168dwv5w0pfy9089a4r0ka1szq6i6blgcfidn7k3vk824lf2n9sq", "depends": ["ExperimentHub", "SpatialExperiment"] }, "WES_1KG_WUGSC": { "name": "WES.1KG.WUGSC", "version": "1.41.0", "sha256": "1vzdp3a6i3klgfj05vk9wlxfnlk8jlqpb85anmpf57k2jgzwpjws", "depends": [] }, "WGSmapp": { "name": "WGSmapp", "version": "1.21.0", "sha256": "11hqs56i5brr0j1zsi11y0xd2d291dm74hxd3hbqzcgybvm541w2", "depends": ["GenomicRanges"] }, "WeberDivechaLCdata": { "name": "WeberDivechaLCdata", "version": "1.11.2", "sha256": "04ndal86dgp40gzjj1lljkifb2cncabfmgjnwnyfqqv18fmmm9pl", "depends": ["ExperimentHub", "SingleCellExperiment", "SpatialExperiment"] }, "XhybCasneuf": { "name": "XhybCasneuf", "version": "1.47.0", "sha256": "13gfj6fiqp10vsx12fp1ik1isjz9bmf8470cgaarv5fnf175kjpx", "depends": ["RColorBrewer", "affy", "ath1121501cdf", "tinesath1cdf"] }, "adductData": { "name": "adductData", "version": "1.26.0", "sha256": "1mdydvw79inp0vzvvzmpikfn7l8qvi2b71qqx7i7b2dydg094j12", "depends": ["AnnotationHub", "ExperimentHub"] }, "affycompData": { "name": "affycompData", "version": "1.48.0", "sha256": "0sfzh3pcgxyqnjj5xn4qibq75nbz6yd9cnxyx3rgx02ksnc89f92", "depends": ["Biobase", "affycomp"] }, "affydata": { "name": "affydata", "version": "1.58.0", "sha256": "1kyn382a7hx1w0gk54yln35canlr6adnghi2x63qsqjxaxd5hcby", "depends": ["affy"] }, "airway": { "name": "airway", "version": "1.30.0", "sha256": "1lfaf74357ij6albfqjxhk81135mj9pj6xh88pai6cwq4ndigwkq", "depends": ["SummarizedExperiment"] }, "antiProfilesData": { "name": "antiProfilesData", "version": "1.46.0", "sha256": "0nmxm2gkdr3il85vw589si6aiq8fkw6aqyc59rw2jn8chl2vqqik", "depends": ["Biobase"] }, "aracne_networks": { "name": "aracne.networks", "version": "1.35.0", "sha256": "1yc60pq77dhbczbng3pady0hfrr65ypq3xgi46244ds5bjr0p17g", "depends": ["viper"] }, "bcellViper": { "name": "bcellViper", "version": "1.46.0", "sha256": "0hyr23p5r9a3ap8n1srvzblgxxsqw5x8xqmvqc7s9rsq33vgfnn7", "depends": ["Biobase"] }, "beadarrayExampleData": { "name": "beadarrayExampleData", "version": "1.47.0", "sha256": "0r9dl64qcgnfzpadlibw4q6q9acjzgs9wayih7fraqn7cm9w22d9", "depends": ["Biobase"] }, "beta7": { "name": "beta7", "version": "1.48.0", "sha256": "0zi8ids611s28991xflmqfk8vkcn9x48m9p1mllgzy8jsg9pnywq", "depends": ["marray"] }, "biotmleData": { "name": "biotmleData", "version": "1.34.0", "sha256": "1bnjfxh3zfibfzir22vyf28cd9z1fz72i1pj5rdpvlpn721dwn1q", "depends": [] }, "biscuiteerData": { "name": "biscuiteerData", "version": "1.24.0", "sha256": "01pla9g71zy6aa37qdaq71qn6w54xsvpc2b70b3dnp94p55d742c", "depends": ["AnnotationHub", "ExperimentHub", "GenomicRanges", "curl"] }, "bladderbatch": { "name": "bladderbatch", "version": "1.48.0", "sha256": "1k1zr6k5acznw70xhkicf9l3pa75ij2jcqj502wnkf72dqls5saf", "depends": ["Biobase"] }, "blimaTestingData": { "name": "blimaTestingData", "version": "1.30.0", "sha256": "081g0yadwy9w4px5zz0mdcf5i1xrvs1871h9pwz9sfymi9flsjr1", "depends": [] }, "bodymapRat": { "name": "bodymapRat", "version": "1.26.0", "sha256": "0w48mxlpp8wa0jiqi6ig4x6dgxyaq9ng8fjr8xhiad7yxr29wifp", "depends": ["ExperimentHub", "SummarizedExperiment"] }, "breakpointRdata": { "name": "breakpointRdata", "version": "1.28.0", "sha256": "05k79dmgv8a74z77i29vanqm5ql1f3893ry98qkixdxa4nspgcii", "depends": [] }, "breastCancerMAINZ": { "name": "breastCancerMAINZ", "version": "1.48.0", "sha256": "13jmy8bg9wkm57xwbvdmp0xf2c4x12ic8vn9bws7h0i87f198d9c", "depends": [] }, "breastCancerNKI": { "name": "breastCancerNKI", "version": "1.48.0", "sha256": "13q95dlpq2rx0mnmf7c8af07hywgchznh3mc6is4b57y9iyph0q2", "depends": [] }, "breastCancerTRANSBIG": { "name": "breastCancerTRANSBIG", "version": "1.48.0", "sha256": "068cl5zyphqdwyisxj6bf3bj8cdxkn25g21x8mz4bci0v1x0l7lj", "depends": [] }, "breastCancerUNT": { "name": "breastCancerUNT", "version": "1.48.0", "sha256": "0p3v5gfnrr6phgl5sxl0slk4clj0i7mwclflc0ryz3ylx6gfnsqb", "depends": [] }, "breastCancerUPP": { "name": "breastCancerUPP", "version": "1.48.0", "sha256": "1vbmxslkzjknzakqzrv8nc8glaxcqa3y8zcjw4wb4ri1nh3kf3f8", "depends": [] }, "breastCancerVDX": { "name": "breastCancerVDX", "version": "1.48.0", "sha256": "0d69y514aidwmacyba3phs6mgsl46rjjmm4f6gmdczfpw0cka1lj", "depends": [] }, "brgedata": { "name": "brgedata", "version": "1.32.0", "sha256": "1vclawjvp49qfb9zdrlrkm4p305vqp9hnxymppiw7yvld33cbbqw", "depends": ["Biobase", "SummarizedExperiment"] }, "bronchialIL13": { "name": "bronchialIL13", "version": "1.48.0", "sha256": "0yqhpg0662lizxd7v2y75q0fj3am97bcwfpwnq4vkk47vzqbk4qv", "depends": ["affy"] }, "bsseqData": { "name": "bsseqData", "version": "0.48.0", "sha256": "0975d86m2icfpm5ljk3w307nn46f6vjc901a1n1dd7wr6p5a08zf", "depends": ["bsseq"] }, "bugphyzz": { "name": "bugphyzz", "version": "1.3.0", "sha256": "1l92a29bcqpavy1mv0nmpyn209lvaqg404lcgviixnyw989c56fm", "depends": ["BiocFileCache", "S4Vectors", "dplyr", "httr2", "purrr", "stringr", "tidyr", "tidyselect"] }, "cMap2data": { "name": "cMap2data", "version": "1.46.0", "sha256": "188r5lcd5hrhsizxq2dqhynvbi1v89mymldm05hkmpldi2qbqh7g", "depends": [] }, "cancerdata": { "name": "cancerdata", "version": "1.48.0", "sha256": "1g61242lgpvgsbih7p8dcibc689ald1wnv7rksf9lnvbrxvw7abs", "depends": ["Biobase"] }, "ccdata": { "name": "ccdata", "version": "1.36.0", "sha256": "15w9sqrhs50sxgp4ghndvhiyvdzn4xy41yy6lzz3yvzaq31qn62q", "depends": [] }, "celarefData": { "name": "celarefData", "version": "1.28.0", "sha256": "11n6kqj765rh0shw1brp9sswsvrvxa02b5r7z08xgjvqbabv8gv5", "depends": [] }, "celldex": { "name": "celldex", "version": "1.19.0", "sha256": "1ylvh48c7caf2ly0iy00m2wh8ahs3wvnaqf7shrxdjxvfr06zd1r", "depends": ["AnnotationDbi", "AnnotationHub", "DBI", "DelayedArray", "DelayedMatrixStats", "ExperimentHub", "Matrix", "RSQLite", "S4Vectors", "SummarizedExperiment", "alabaster_base", "alabaster_matrix", "alabaster_se", "gypsum", "jsonlite"] }, "cfToolsData": { "name": "cfToolsData", "version": "1.8.0", "sha256": "086nhzr2n54m8sb444dy05j3fkr6vpqp4klpjhx38fvl6g41kpy0", "depends": ["ExperimentHub"] }, "chipenrich_data": { "name": "chipenrich.data", "version": "2.33.0", "sha256": "018dnjrx6g33ap1144q6ld4ayl16hkr37wnbbbazisbq4iwfw741", "depends": ["AnnotationDbi", "BiocGenerics", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "readr", "rtracklayer"] }, "chipseqDBData": { "name": "chipseqDBData", "version": "1.26.0", "sha256": "0s0xdf52daii0i77s8clpxavqwlaz5nia0sxi814q50d9p14xdph", "depends": ["AnnotationHub", "ExperimentHub", "Rsamtools", "S4Vectors"] }, "chromstaRData": { "name": "chromstaRData", "version": "1.36.0", "sha256": "0v8blcacwixqzdpqalx3bajakn0nmkmagpdzccfpi7ry3sazl2f4", "depends": [] }, "clustifyrdatahub": { "name": "clustifyrdatahub", "version": "1.19.0", "sha256": "0nig3qk4p2x31sjijvz3kymaqyc93wsp5cip5jc9x0c7x8armx0r", "depends": ["ExperimentHub"] }, "cnvGSAdata": { "name": "cnvGSAdata", "version": "1.46.0", "sha256": "013ihcpylm8flfhic4j5hz6gwbwsgv1abjw8b4bqrxbkjkiv8xv2", "depends": ["cnvGSA"] }, "colonCA": { "name": "colonCA", "version": "1.52.0", "sha256": "0vkdx969yh11jl9nr0nxbxb2c91ld1y2rr705zl7kry2g36lspmr", "depends": ["Biobase"] }, "crisprScoreData": { "name": "crisprScoreData", "version": "1.13.0", "sha256": "1wr8msls016vl9a5789hb2ja29b9v623a0dia9d1n3wwvjws3x8y", "depends": ["AnnotationHub", "ExperimentHub"] }, "curatedAdipoArray": { "name": "curatedAdipoArray", "version": "1.21.0", "sha256": "1q0dznm3kz90f9is402l0lhcywmwi92k9zfg5p7x9nv2g9a2h26y", "depends": [] }, "curatedAdipoChIP": { "name": "curatedAdipoChIP", "version": "1.25.0", "sha256": "0a2bd90q3zr723gy0xzjs39f8jw5vd55m6a089kdcc31qykhw6a8", "depends": ["ExperimentHub", "SummarizedExperiment"] }, "curatedAdipoRNA": { "name": "curatedAdipoRNA", "version": "1.25.0", "sha256": "02vp3143x7m1qncam3lngx06qpwkgj9rgpx8vpi3m3mg5qqlsfak", "depends": ["SummarizedExperiment"] }, "curatedBladderData": { "name": "curatedBladderData", "version": "1.45.0", "sha256": "0czy8kzr2ycgir4gpbj34b339sf2s3rz1dczjwwbc0p857zqpj90", "depends": ["affy"] }, "curatedBreastData": { "name": "curatedBreastData", "version": "2.37.0", "sha256": "0x7mhgd85r3zma2i3i0dzvzwm8md3z1yhz3ghw5xsmda98aqi613", "depends": ["Biobase", "BiocStyle", "XML", "ggplot2", "impute"] }, "curatedMetagenomicData": { "name": "curatedMetagenomicData", "version": "3.17.4", "sha256": "1hfxsm33d2bhmfp0qc7gmfypc0vb9zrljgysvwpjcqckldrs0sgh", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "TreeSummarizedExperiment", "dplyr", "magrittr", "mia", "purrr", "rlang", "stringr", "tibble", "tidyr", "tidyselect"] }, "curatedOvarianData": { "name": "curatedOvarianData", "version": "1.47.2", "sha256": "13nh0lpr94hpkzysa9cmbkifa1102k7kflvwkjsdq686qijk7jm2", "depends": ["Biobase", "BiocGenerics"] }, "curatedPCaData": { "name": "curatedPCaData", "version": "1.5.0", "sha256": "1rpvnan2jcdl58da4sxsx7sfy53wb87jlfshjmjz13iiayfhvw6r", "depends": ["AnnotationHub", "ExperimentHub", "MultiAssayExperiment", "RaggedExperiment", "S4Vectors", "reshape2", "rlang"] }, "curatedTBData": { "name": "curatedTBData", "version": "2.5.0", "sha256": "1x648659xg5805mz8w3aifg945z35dh6ahaq5qngqmnr08jjk3nk", "depends": ["AnnotationHub", "ExperimentHub", "MultiAssayExperiment", "rlang"] }, "curatedTCGAData": { "name": "curatedTCGAData", "version": "1.31.3", "sha256": "1wcy1laxsbx4shj428gddsw8dsg2aznxxsj510v1nwz0hhigy81c", "depends": ["AnnotationHub", "ExperimentHub", "HDF5Array", "MultiAssayExperiment", "S4Vectors", "SummarizedExperiment"] }, "davidTiling": { "name": "davidTiling", "version": "1.49.0", "sha256": "0rkdwzwydqj326n7s3akx8vjdkh66zwsysnl3gv9ilqz9dlfim99", "depends": ["Biobase", "GO_db", "tilingArray"] }, "depmap": { "name": "depmap", "version": "1.23.0", "sha256": "1impdryqm87rmjviimjkmllrjlw47d1c4jzmbkbizaw9mj7k3lhf", "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub", "curl", "dplyr", "httr2", "tibble"] }, "derfinderData": { "name": "derfinderData", "version": "2.27.0", "sha256": "1j6xvr72vlsri6m3hjgsjpxg0almsppbzak9x6ml40gzw44w72v1", "depends": [] }, "diffloopdata": { "name": "diffloopdata", "version": "1.37.0", "sha256": "1sd6vw21zzpyd8n0xdki13g6knrj3y66ffg671516cr8i9izjd69", "depends": [] }, "diggitdata": { "name": "diggitdata", "version": "1.41.0", "sha256": "1iiigxg834d287vdasxsyg8zyr99mzysg69gag49d0c8kfh0flyp", "depends": ["Biobase", "viper"] }, "dorothea": { "name": "dorothea", "version": "1.21.0", "sha256": "0w6ci630jwly7i6gp0y2zwwh6waags2cybb3ayrl1s5viz3czvvf", "depends": ["bcellViper", "decoupleR", "dplyr", "magrittr"] }, "dressCheck": { "name": "dressCheck", "version": "0.47.0", "sha256": "0wnl9binajhnwwnx6yszwwqyaj98a9k6hy8kck0h5ql2la882pf0", "depends": ["Biobase"] }, "dyebiasexamples": { "name": "dyebiasexamples", "version": "1.49.0", "sha256": "0v2avihnyn4dyfgm32yxjbp3kfkpv3j9c53hc818vjr7zhjb04cv", "depends": ["GEOquery", "marray"] }, "easierData": { "name": "easierData", "version": "1.15.0", "sha256": "1i7xibpb96y59qzvh9hlswk8f7bl9gilzgfla51lya82n68i2vrx", "depends": ["AnnotationHub", "ExperimentHub", "SummarizedExperiment"] }, "ecoliLeucine": { "name": "ecoliLeucine", "version": "1.49.0", "sha256": "0avxcc3h4xfnp141g9jlfwcxfw4fbi9q5gbkr2fc762jy41xzmq0", "depends": ["affy", "ecolicdf"] }, "emtdata": { "name": "emtdata", "version": "1.17.0", "sha256": "18g7ly1srsxd4dbb383rhcyamka7nj73j7626iar1d08isz8nv20", "depends": ["ExperimentHub", "SummarizedExperiment", "edgeR"] }, "eoPredData": { "name": "eoPredData", "version": "1.3.0", "sha256": "002almjc7pss9i17hfiwz013f7h0xj98h34gk83hlfxrf0x0350r", "depends": ["ExperimentHub"] }, "epimutacionsData": { "name": "epimutacionsData", "version": "1.13.0", "sha256": "1yzylg2wam7zn9bgd4rqa78xr31jba0sv67rgpacq9ggq1pghbpr", "depends": [] }, "estrogen": { "name": "estrogen", "version": "1.55.0", "sha256": "1qxsn3d9jfarpy6ks78hz6zlkkq03in5in26av15i7klwy16hqh5", "depends": [] }, "etec16s": { "name": "etec16s", "version": "1.37.0", "sha256": "0zk9kbg6c9k316v2ccw0v653i6dqr1yp11dzk6jaxs3n6k8gq42d", "depends": ["Biobase", "metagenomeSeq"] }, "ewceData": { "name": "ewceData", "version": "1.17.0", "sha256": "1375il9kjp30srcaksizx8h20q807ami9h7vhhnk51fiq3mrjp6n", "depends": ["ExperimentHub"] }, "faahKO": { "name": "faahKO", "version": "1.49.1", "sha256": "1xzdfh5b32xjnl36lv19w8vaxifidwdq86q9srahnvp2x0yqgxy6", "depends": ["xcms"] }, "fabiaData": { "name": "fabiaData", "version": "1.47.0", "sha256": "0vbfsxijin8szmqxl0s8pbk5iqnbxkc107r61rii6jwyh8203wyy", "depends": ["Biobase"] }, "ffpeExampleData": { "name": "ffpeExampleData", "version": "1.47.0", "sha256": "0wywqs4c6zzwb1yicmkg93a2sx9yxx7d1vi707ysqfs2g0d4wvlb", "depends": ["lumi"] }, "fibroEset": { "name": "fibroEset", "version": "1.51.0", "sha256": "017zdn8pc94wddkzmijccm8c6g627ncmk7cv463198vnmichgncb", "depends": ["Biobase"] }, "fission": { "name": "fission", "version": "1.29.0", "sha256": "1rhw53icpyamm7xpylh8ivfigmxvvwn3cdcmrvldxs4cghysnxpk", "depends": ["SummarizedExperiment"] }, "flowPloidyData": { "name": "flowPloidyData", "version": "1.35.0", "sha256": "1548y586pwz0dg87myzlmjpsr3bnmpf4h376y10g82xslkxmq51r", "depends": [] }, "flowWorkspaceData": { "name": "flowWorkspaceData", "version": "3.21.0", "sha256": "04cp4sm1rdjabinqscpksq9f7nr437zb9dn2fa1kijpqmxg6by15", "depends": [] }, "fourDNData": { "name": "fourDNData", "version": "1.9.0", "sha256": "07f6m04cv8x61bhfdd6hyfjjm9j698919kk5wr8ds6bgs6391qa6", "depends": ["BiocFileCache", "GenomicRanges", "HiCExperiment", "IRanges", "S4Vectors"] }, "frmaExampleData": { "name": "frmaExampleData", "version": "1.45.0", "sha256": "1jzikp5jqxk88qa2hiyv898h1p0vx3l6jdh7aydlgzajzrrxanhs", "depends": [] }, "furrowSeg": { "name": "furrowSeg", "version": "1.37.0", "sha256": "11q9kcjiz9zf4r2g3q0lni4cxcp2mnbq014b1pna0jg7hd2pspr2", "depends": ["EBImage", "abind", "dplyr", "locfit", "tiff"] }, "gDNAinRNAseqData": { "name": "gDNAinRNAseqData", "version": "1.9.0", "sha256": "150n8vlh9400x2000jmn9lbm6qg7n6i1326xjifv820iznmi50zc", "depends": ["BiocGenerics", "ExperimentHub", "RCurl", "Rsamtools", "XML"] }, "gDRtestData": { "name": "gDRtestData", "version": "1.7.3", "sha256": "1dgkh1w8dl5pw22i3wrpbwkwfll589h244lgdvf6xarj860c0yfl", "depends": ["checkmate", "data_table"] }, "gageData": { "name": "gageData", "version": "2.47.0", "sha256": "0sfpwxpa1v2grbqvfzxslmhzbn25g1rmvjzdl72h4m2mzzaw29hc", "depends": [] }, "gaschYHS": { "name": "gaschYHS", "version": "1.47.0", "sha256": "0lcgs354fcclwr3lf54s1xcj4bnf70ydkn2pwrm3k455lqrqwbz6", "depends": ["Biobase"] }, "gcspikelite": { "name": "gcspikelite", "version": "1.47.0", "sha256": "0h5fji18bk3v9chli3bi1s0yp4pdhiachn8a6m1571fnd45z6ixh", "depends": [] }, "geneLenDataBase": { "name": "geneLenDataBase", "version": "1.45.0", "sha256": "1v8q2b0kgsdvibxfqqvzxrg8xyp3krpffkdiqcpiqvnqpj1dhiqh", "depends": ["GenomicFeatures", "rtracklayer", "txdbmaker"] }, "genomationData": { "name": "genomationData", "version": "1.41.0", "sha256": "0mxwg0niq97d6xm03gl80179a4lvlgbmg5mrnc62jaj034jagqzk", "depends": [] }, "golubEsets": { "name": "golubEsets", "version": "1.51.0", "sha256": "118v4v24njmdfwfbhz71zxkls53a0mhj1i5q99xjkxx34yy26bm2", "depends": ["Biobase"] }, "gpaExample": { "name": "gpaExample", "version": "1.21.0", "sha256": "1bwc0p7iyymrppaj09j0h05sfgkay83llf3sfvdbv81fjv47m4sd", "depends": [] }, "grndata": { "name": "grndata", "version": "1.41.0", "sha256": "1jp73y5yakqc6gs96gj8bbgp1zrqny1mpssxbhiv41ixapmq1b9z", "depends": [] }, "h5vcData": { "name": "h5vcData", "version": "2.29.0", "sha256": "1shqf9m3g4lzqmjhp33vp56akw7qpzl9gx7cnlmh94ac1flb5mqs", "depends": [] }, "hapmap100khind": { "name": "hapmap100khind", "version": "1.51.0", "sha256": "0b2zzlqkzygblx4jmp495fak6y95bb82p3grl3k16lmk15798z8j", "depends": [] }, "hapmap100kxba": { "name": "hapmap100kxba", "version": "1.51.0", "sha256": "0rbk3yjphyl0scygn6asl0fcz6qpjdff9v43y60i46hs5pgf4p2m", "depends": [] }, "hapmap500knsp": { "name": "hapmap500knsp", "version": "1.51.0", "sha256": "1l5060skciws26cvc3x978qq4ykm213bbmbqx09gm6pm6bi0dkm2", "depends": [] }, "hapmap500ksty": { "name": "hapmap500ksty", "version": "1.51.0", "sha256": "1x3fsn4996c4jmxfsq6zdg4kflnfk84fn9phg8z3hjvdjqlha4lq", "depends": [] }, "hapmapsnp5": { "name": "hapmapsnp5", "version": "1.51.0", "sha256": "1yf7bwpc6imqjn6lpq1b4clx4clxpl4q3hmgzg1ly45d52vnf7bf", "depends": [] }, "hapmapsnp6": { "name": "hapmapsnp6", "version": "1.51.0", "sha256": "1niqrvfg1f4k92mmbn2qxag3f4g2yb388kzpi47v7lyj35bbrjlp", "depends": [] }, "harbChIP": { "name": "harbChIP", "version": "1.47.0", "sha256": "0g5xr619jh4n5crja2rxs2x6dz2csbj0hpav185k962936m09b43", "depends": ["Biobase", "Biostrings", "IRanges"] }, "healthyControlsPresenceChecker": { "name": "healthyControlsPresenceChecker", "version": "1.13.0", "sha256": "0h2s632qp0a92ix388d49qk56kvcfysckiaky9kkqdgipkjrnwb2", "depends": ["GEOquery", "geneExpressionFromGEO", "magrittr", "xml2"] }, "healthyFlowData": { "name": "healthyFlowData", "version": "1.47.0", "sha256": "026v75v3vlz6mmhy3fpqbv8hjcspspql89gj77ych81vbx6058fk", "depends": ["flowCore"] }, "hgu133abarcodevecs": { "name": "hgu133abarcodevecs", "version": "1.47.0", "sha256": "1sj136a495mphh4mpyvl7rh07ks0y513magxgj0zr89g52mw2i8b", "depends": [] }, "hgu133plus2CellScore": { "name": "hgu133plus2CellScore", "version": "1.29.0", "sha256": "1vhv47gm5sfvmm7d3w5dca4frir1p26iksdam9khajx99ki4krlr", "depends": ["Biobase"] }, "hgu133plus2barcodevecs": { "name": "hgu133plus2barcodevecs", "version": "1.47.0", "sha256": "1fygf4faasmzdgy7q2a80mqq7whrlrn6sz4gp8lhbrl1gxz5r6ac", "depends": [] }, "hgu2beta7": { "name": "hgu2beta7", "version": "1.49.0", "sha256": "14kdnls6fn9qibd2izbgwq3cicnnadwc6xqbi5z6yj564i9df3bq", "depends": [] }, "homosapienDEE2CellScore": { "name": "homosapienDEE2CellScore", "version": "1.5.0", "sha256": "067qjsjd5xrkgpx64rlxv4mf7mpvx8djrw449xiyc30g5d8v1mfx", "depends": ["BiocGenerics", "DESeq2", "ExperimentHub", "MatrixGenerics", "Rtsne", "S4Vectors", "SummarizedExperiment", "getDEE2"] }, "humanHippocampus2024": { "name": "humanHippocampus2024", "version": "1.1.0", "sha256": "1z5wf82vzdhsb1vhwsxmq3pn25mpkjabnf9q4xn8axw3cvigcgzs", "depends": ["ExperimentHub", "SpatialExperiment", "SummarizedExperiment"] }, "humanStemCell": { "name": "humanStemCell", "version": "0.49.0", "sha256": "1g1ijhq7yagal92qbp5csp1clp3xgjx2blsjpl5s40bhcjpw3ayr", "depends": ["Biobase", "hgu133plus2_db"] }, "iModMixData": { "name": "iModMixData", "version": "0.99.6", "sha256": "0n2wnwafxv23py2q4gpsccqp6048181am8vsxvdk47fl2jspv4cq", "depends": ["ExperimentHub"] }, "imcdatasets": { "name": "imcdatasets", "version": "1.17.0", "sha256": "17f5jc0k3vzjfvvygqs771sn5avhpppx5wacf7jsk8j6j1kk3n3s", "depends": ["DelayedArray", "ExperimentHub", "HDF5Array", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "cytomapper"] }, "kidpack": { "name": "kidpack", "version": "1.51.0", "sha256": "1f5w2h8afvhnjspwbm8qdccylkwynzd2q0al0ifjh25gi5gd19qq", "depends": ["Biobase"] }, "leeBamViews": { "name": "leeBamViews", "version": "1.45.0", "sha256": "0ci92x3hsxdmbgnbzvd57ij3d1vl02xcjvqvdx7017yxxajh2lsf", "depends": ["BSgenome", "Biobase", "GenomicAlignments", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors"] }, "leukemiasEset": { "name": "leukemiasEset", "version": "1.45.0", "sha256": "1dadzhllzzb55r5d7ihd7y1dlw6gjzi51yx7zd0a23mzrj5j8rsc", "depends": ["Biobase"] }, "lumiBarnes": { "name": "lumiBarnes", "version": "1.49.0", "sha256": "1xx9mz4jaggrgf4dg24b0i9bzzjkhrri33zvkfcm5vnkskkikbf3", "depends": ["Biobase", "lumi"] }, "lungExpression": { "name": "lungExpression", "version": "0.47.0", "sha256": "1r8522f9080v2c5w17lzwrvxrdfr8vvwlrnrr4m86xlj7zhqs96x", "depends": ["Biobase"] }, "lydata": { "name": "lydata", "version": "1.35.0", "sha256": "1wzr9x889bnx3839jpx7hawi8jji0kck9lm2jyvl00bgqgivd87i", "depends": [] }, "mCSEAdata": { "name": "mCSEAdata", "version": "1.29.1", "sha256": "1k7k6wiggsa5yjis903iahdk5c3mng0is0jslqgqlx15a418b8kz", "depends": ["GenomicRanges"] }, "macrophage": { "name": "macrophage", "version": "1.25.0", "sha256": "03rjgfnz3711n4vn4crnjrm6av56hh92ir7xb2r59zb0d1jh02dh", "depends": [] }, "mammaPrintData": { "name": "mammaPrintData", "version": "1.45.0", "sha256": "0iab60g1jwx8w58hwpg64i2v3ggz90wdnbzz2qf8ccsqcmb1birm", "depends": [] }, "maqcExpression4plex": { "name": "maqcExpression4plex", "version": "1.53.0", "sha256": "1ajw4yx1alrsb11yirw258d4zr5x0ixdrggsamh0iz60wi14y13d", "depends": [] }, "marinerData": { "name": "marinerData", "version": "1.9.0", "sha256": "1aza3ksxb0cd1jwk5whbp763cbvlckzb2zamx60xlmvj5ija0zai", "depends": ["ExperimentHub"] }, "mcsurvdata": { "name": "mcsurvdata", "version": "1.27.0", "sha256": "1bammzra3fh3ly2jw0cqqfx5v31jqb0ilzlig4lvzhw20pvprdaw", "depends": ["AnnotationHub", "Biobase", "ExperimentHub"] }, "metaMSdata": { "name": "metaMSdata", "version": "1.45.0", "sha256": "1pdmb3ai5wmw7i0b6jh4kmgflndw7qp2sf5yj4kbm6a5pmm06l86", "depends": [] }, "methylclockData": { "name": "methylclockData", "version": "1.17.0", "sha256": "1z4q4i4igp98hsbq4fglrxij1m11150h0f07z7xbw5qp1f506qz4", "depends": ["ExperimentHub", "ExperimentHubData"] }, "miRNATarget": { "name": "miRNATarget", "version": "1.47.0", "sha256": "05fk2ri5zb6q91ixqfcs05yms5s2qb7hbz0yl58khdsr32rjdb1n", "depends": ["Biobase"] }, "miRcompData": { "name": "miRcompData", "version": "1.39.0", "sha256": "0c1lcy1d6zznirw4nlaarh69isgilxbwq84jk9414j7j7z8y1n2j", "depends": [] }, "microRNAome": { "name": "microRNAome", "version": "1.31.0", "sha256": "0makcnbrm1pbh4bszhx67hfnmcpc0xpgfdg16263v8nybqh8jmrz", "depends": ["SummarizedExperiment"] }, "microbiomeDataSets": { "name": "microbiomeDataSets", "version": "1.17.0", "sha256": "16bw1y1dwxbmh0kclxqvnhacf5yxf2a869p1lfndk23xvyvd1m46", "depends": ["BiocGenerics", "Biostrings", "ExperimentHub", "MultiAssayExperiment", "SummarizedExperiment", "TreeSummarizedExperiment", "ape"] }, "minfiData": { "name": "minfiData", "version": "0.55.0", "sha256": "1vy2rz077qifbjws1gsrwx56j08h7xwxl0ka3q6ga7r2503a2aig", "depends": ["IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "minfi"] }, "minfiDataEPIC": { "name": "minfiDataEPIC", "version": "1.35.0", "sha256": "1lwhq3wkfilb9vx06ww5rwz30gd4421wvcifa14vpy6d4ykd3cl1", "depends": ["IlluminaHumanMethylationEPICanno_ilm10b2_hg19", "IlluminaHumanMethylationEPICmanifest", "minfi"] }, "minionSummaryData": { "name": "minionSummaryData", "version": "1.39.0", "sha256": "102a2dwvrbwbhb8vkmsxfrcbzmi4ciqgzj970lz7lvbka4vk7l87", "depends": [] }, "mosaicsExample": { "name": "mosaicsExample", "version": "1.47.0", "sha256": "1r2j1dfzhsfgjg789p9ghm07hv97xiczxvyzqxjfrbq6d7ab1gyd", "depends": [] }, "mouse4302barcodevecs": { "name": "mouse4302barcodevecs", "version": "1.47.0", "sha256": "10kbmsbil67pbf439d7lcvh1j956xwnkgx2pm5jx9l80qc0n61nx", "depends": [] }, "msPurityData": { "name": "msPurityData", "version": "1.37.0", "sha256": "184f8c8fd5hyk87d6zpp177qbq6pyp0f4j028l26dwfgj9ia5prn", "depends": [] }, "msd16s": { "name": "msd16s", "version": "1.29.0", "sha256": "0s26bfw4wr5d1f9l9q29ksphds1g6j9dk6mmcs36knq6isd9i97k", "depends": ["Biobase", "metagenomeSeq"] }, "msdata": { "name": "msdata", "version": "0.49.0", "sha256": "11jr4wdq2i1ng8x3n4bxb19w6wfprvmrkcwajp75ck5sz3qzhx33", "depends": [] }, "msigdb": { "name": "msigdb", "version": "1.17.0", "sha256": "1xmmf63vv6s53c34aja988m40knx99w317qd64aa36ahkb79mwdq", "depends": ["AnnotationDbi", "AnnotationHub", "ExperimentHub", "GSEABase", "org_Hs_eg_db", "org_Mm_eg_db"] }, "msqc1": { "name": "msqc1", "version": "1.37.0", "sha256": "0gw99qp3xa62gzg0sbbmsjw1cr9vcfsczyjpjw6f5r7rlfdv7vl8", "depends": ["lattice"] }, "mtbls2": { "name": "mtbls2", "version": "1.39.1", "sha256": "1qpv1pm7w1kydpsagm4xj3ahaplm3fcg1l6m9l8mb4lvymwbbgxq", "depends": [] }, "muSpaData": { "name": "muSpaData", "version": "1.1.0", "sha256": "013czfn74fzl919c8fa2lv39x2dnih6fahdnj5fd4ajnn9ykfd54", "depends": ["ExperimentHub"] }, "muleaData": { "name": "muleaData", "version": "1.5.0", "sha256": "17ffkvjzsg30m0x8h6b2ymxpgjf9rpdnibnv0ybl1j09k1lmdpji", "depends": [] }, "multiWGCNAdata": { "name": "multiWGCNAdata", "version": "1.7.0", "sha256": "11an123qynhl77d3lj0777s493i7l7ykb2glf1r9cd4mha886020", "depends": ["ExperimentHub"] }, "muscData": { "name": "muscData", "version": "1.23.0", "sha256": "1in949wdym8b4yzikr89axbaa5c0q5rldigqi09c1d63sdw9falv", "depends": ["ExperimentHub", "SingleCellExperiment"] }, "mvoutData": { "name": "mvoutData", "version": "1.45.0", "sha256": "1f8zkwnnbiy66sadv9n32y5iwk4i05a1gm3jxwnxpdkw6a0lwsbc", "depends": ["Biobase", "affy", "lumi"] }, "nanotubes": { "name": "nanotubes", "version": "1.25.0", "sha256": "1ss5jc06gcxpc6w06fnip9i9h9llqx97hicaqh6irmk7q1kizm8q", "depends": [] }, "nmrdata": { "name": "nmrdata", "version": "0.99.2", "sha256": "0xd3dsbmn1pqvqvckl5z0fd9q8s0v88lcnagz2g8cydwn9dj7cyy", "depends": ["ExperimentHub"] }, "nullrangesData": { "name": "nullrangesData", "version": "1.15.0", "sha256": "1bdr4cznawpryrib1kzkznbksr089rdbjsyx0fs9hg6j9zp8809g", "depends": ["ExperimentHub", "GenomicRanges", "InteractionSet"] }, "oct4": { "name": "oct4", "version": "1.25.0", "sha256": "0k073a2f3sb0if3kbniy57dz5kwxqmwis13kxhr16h6kcxq2awh5", "depends": [] }, "octad_db": { "name": "octad.db", "version": "1.11.0", "sha256": "0llybj9i02ybrh3xhs3bc28zypsvbyznkw6nfwlj73gdqswfnf7y", "depends": ["ExperimentHub"] }, "optimalFlowData": { "name": "optimalFlowData", "version": "1.21.0", "sha256": "092qx4lg2rr8prb99dyl2xfsj389p4rhpqpbnkm76y268wgd1aym", "depends": [] }, "orthosData": { "name": "orthosData", "version": "1.7.0", "sha256": "1qbzkhia8r1l352zikzzqpzb3qiahrsjrm14xs2fjh2bxbvk0anl", "depends": ["AnnotationHub", "BiocFileCache", "ExperimentHub", "HDF5Array", "SummarizedExperiment", "stringr"] }, "pRolocdata": { "name": "pRolocdata", "version": "1.47.0", "sha256": "1lpnf0qf3j4nmlcah30sr1qv6yfgs579sa1c6qxfb8f6laf14spp", "depends": ["Biobase", "MSnbase"] }, "pasilla": { "name": "pasilla", "version": "1.37.0", "sha256": "12i8r8s68gcb747j9qnq2sijrf75xy4l34n96abg7g238nvyr1k5", "depends": ["DEXSeq"] }, "pasillaBamSubset": { "name": "pasillaBamSubset", "version": "0.47.0", "sha256": "05p4ja7s5bwv16wip8nv3cp6ii7gkix1g0r7g68cnxj0wvivij3k", "depends": [] }, "pd_atdschip_tiling": { "name": "pd.atdschip.tiling", "version": "0.47.0", "sha256": "1qa0nifys0dwhxd56l0v0d9nkv0bxpw9gz5a387gj9sik7lkrp0d", "depends": ["Biostrings", "DBI", "IRanges", "RSQLite", "S4Vectors", "oligo", "oligoClasses"] }, "pepDat": { "name": "pepDat", "version": "1.29.0", "sha256": "16my2q7wa5qzx72iww8i52ssj1s893canhr2x126vjf6szgyd8hr", "depends": ["GenomicRanges"] }, "plotgardenerData": { "name": "plotgardenerData", "version": "1.15.0", "sha256": "1f5m51408ll27i4wqz7hqg8qagly56968ifpv6jm6x75128wripg", "depends": [] }, "prebsdata": { "name": "prebsdata", "version": "1.45.0", "sha256": "19jh5i9hn4hs08wc1b94kjgx2h9fy0r9is8wq5sc574iw5y7c573", "depends": [] }, "preciseTADhub": { "name": "preciseTADhub", "version": "1.17.0", "sha256": "0rpy0x9ap3acbp0afkb87q2y88nlw2px21vz35gfq7vd4vb7pavv", "depends": ["ExperimentHub"] }, "prostateCancerCamcap": { "name": "prostateCancerCamcap", "version": "1.37.0", "sha256": "01vm6m2qxcxsfnl5v5b4i6l6wadv9bl5qhphw3gd29m2b4gkr992", "depends": ["Biobase"] }, "prostateCancerGrasso": { "name": "prostateCancerGrasso", "version": "1.37.0", "sha256": "17nkak1cymn240iq6fm1bm58i6kwi27abvs2zrs32wjjig11icr5", "depends": ["Biobase"] }, "prostateCancerStockholm": { "name": "prostateCancerStockholm", "version": "1.37.0", "sha256": "12lil38q57lacybykwjlfbrnnh7g6a58xw36bl3sglvk3g9rdhjg", "depends": ["Biobase"] }, "prostateCancerTaylor": { "name": "prostateCancerTaylor", "version": "1.37.0", "sha256": "1r0zz8qivncfij1ccc0g6dfbaylgizhf589sfpy16mv5rvjxpf22", "depends": ["Biobase"] }, "prostateCancerVarambally": { "name": "prostateCancerVarambally", "version": "1.37.0", "sha256": "0c73s4lnmk31idmf5brzsk65qrbvri3326dh8ini9s0q2rza72h7", "depends": ["Biobase"] }, "ptairData": { "name": "ptairData", "version": "1.17.0", "sha256": "0zc0bxvqzb5ws3jllsvm1bjh9ld6xzdbh50f9q73amfc631ggww0", "depends": ["rhdf5", "signal"] }, "pumadata": { "name": "pumadata", "version": "2.45.0", "sha256": "0ydgzwcvl31yqsgr0nzz1b53srrd1c0aagk6mgmvwmkmp1hz38ba", "depends": ["Biobase", "oligo", "puma"] }, "qPLEXdata": { "name": "qPLEXdata", "version": "1.27.0", "sha256": "15fq5yzpipp2g7fx6nh766ykq84rr82yi6cccq7kqi9c1aywgwbf", "depends": ["MSnbase", "dplyr", "knitr", "qPLEXanalyzer"] }, "rRDPData": { "name": "rRDPData", "version": "1.29.1", "sha256": "0d4dbll3ga8bvwrzjf5nk19s7w6pdsfnkxdx76sw491fksqvj5wx", "depends": ["rRDP"] }, "raerdata": { "name": "raerdata", "version": "1.7.0", "sha256": "01z7753zvi8gjx295mx6jj1j71s1xzvvxwdnyb9j4c8f6pq0qq0h", "depends": ["BiocGenerics", "ExperimentHub", "Rsamtools", "SingleCellExperiment", "rtracklayer"] }, "rcellminerData": { "name": "rcellminerData", "version": "2.31.0", "sha256": "0vwq5505f2h0m8nqyb948ld3wnjblzs9cnyp811xk5x4w91mhw7x", "depends": ["Biobase"] }, "rheumaticConditionWOLLBOLD": { "name": "rheumaticConditionWOLLBOLD", "version": "1.47.0", "sha256": "1xk9j3lzvz6dfpkj3dcp2fimjp8vscpfv445f18sbj8nyn1mspqc", "depends": [] }, "sampleClassifierData": { "name": "sampleClassifierData", "version": "1.33.0", "sha256": "0r32n6dlka8r9frf03ij278vshi6k9aznd9ljx0qj97m9m7r8xy9", "depends": ["SummarizedExperiment"] }, "scATAC_Explorer": { "name": "scATAC.Explorer", "version": "1.15.1", "sha256": "15yf3s3gg4f8arplssy9wxx3vgnv5vz01k0bxmdcjpsqiy2whvwv", "depends": ["BiocFileCache", "Matrix", "S4Vectors", "SingleCellExperiment", "data_table", "zellkonverter"] }, "scMultiome": { "name": "scMultiome", "version": "1.9.0", "sha256": "0pvkzskghfc09imfivrw8brbppf33mgrgdmvg0rrhgr8nnd6jfc6", "depends": ["AnnotationHub", "AzureStor", "ExperimentHub", "GenomicRanges", "HDF5Array", "MultiAssayExperiment", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "alabaster_matrix", "checkmate", "rhdf5"] }, "scRNAseq": { "name": "scRNAseq", "version": "2.23.1", "sha256": "1pdp92ns2d2hvljf5af7cingb67k84rxdq50xg14lmyh96bg1m84", "depends": ["AnnotationDbi", "AnnotationHub", "BiocGenerics", "DBI", "DelayedArray", "ExperimentHub", "GenomicFeatures", "GenomicRanges", "Matrix", "RSQLite", "S4Vectors", "SingleCellExperiment", "SparseArray", "SummarizedExperiment", "alabaster_base", "alabaster_matrix", "alabaster_sce", "ensembldb", "gypsum", "jsonlite"] }, "scTHI_data": { "name": "scTHI.data", "version": "1.21.0", "sha256": "1min6al28p9dgiid51q9ksyz1pjqa9j56zycgx803mg0ghyx0gla", "depends": [] }, "scaeData": { "name": "scaeData", "version": "1.5.0", "sha256": "1vn01yabfm1cw9db5fkn4pz0p2lrh5zaacyamsbqd6m8v33rwd9v", "depends": ["ExperimentHub"] }, "scanMiRData": { "name": "scanMiRData", "version": "1.15.0", "sha256": "1kck1w93ypj2y5d2pixbsyxmmnllc4p89wn62i70w5dnvwp0yra7", "depends": ["scanMiR"] }, "scpdata": { "name": "scpdata", "version": "1.17.1", "sha256": "1nmydvii9xrhyv148xjxmv4689p03cmpcy70wx0y26nrwc0srnay", "depends": ["AnnotationHub", "ExperimentHub", "QFeatures", "S4Vectors", "SingleCellExperiment"] }, "seq2pathway_data": { "name": "seq2pathway.data", "version": "1.41.0", "sha256": "1di03fkpkllshwvcc3wkxdi8krrjxd5ap26sffj2irm1ybkjd8fs", "depends": [] }, "seqc": { "name": "seqc", "version": "1.43.0", "sha256": "1lnnc43dq0g57ph6x6pc7bcy3f1pm7bdmq6vzm84cv41xxf1cf28", "depends": ["Biobase"] }, "serumStimulation": { "name": "serumStimulation", "version": "1.45.0", "sha256": "0y4jv8l8gqf2aj8z2zffx0p39m12hrfwch6v2vxn7ag8day8gz82", "depends": [] }, "sesameData": { "name": "sesameData", "version": "1.27.1", "sha256": "0sw3ny82giivc3hqip1y8iwshvvrnr7x5v6yswbpyrbndf401f5b", "depends": ["AnnotationHub", "ExperimentHub", "GenomicRanges", "IRanges", "S4Vectors", "Seqinfo", "readr", "stringr"] }, "seventyGeneData": { "name": "seventyGeneData", "version": "1.45.0", "sha256": "053zir4rxpwb8j6dnmmzmf7pf6njmyaxi63s5f0y96hbd6ssjw70", "depends": [] }, "shinyMethylData": { "name": "shinyMethylData", "version": "1.29.0", "sha256": "0rb2qvldd9mz9pcmgw79687wy4yhm1d1ndxkdq11k8d8bhqxi0cd", "depends": [] }, "signatureSearchData": { "name": "signatureSearchData", "version": "1.23.0", "sha256": "0nkaspz05vkn0f4i17bhx7zjdxv589nxay3hrmrxxdixfmvs2nq2", "depends": ["Biobase", "ExperimentHub", "R_utils", "affy", "dplyr", "limma", "magrittr", "rhdf5"] }, "simpIntLists": { "name": "simpIntLists", "version": "1.45.0", "sha256": "0v5b87mknr729a1qq7hcaw2rdhhj5cbi9lyjl17kphjcqfsialjw", "depends": [] }, "smokingMouse": { "name": "smokingMouse", "version": "1.7.0", "sha256": "04v3hl13rqbwgx15y6bcp718hwzw31wbxw2in7crlkh5dbwpl6ka", "depends": [] }, "spatialDmelxsim": { "name": "spatialDmelxsim", "version": "1.15.0", "sha256": "0jsq0w9qn4babivpg7bmg0m5dmf5h44mmn8is94mji9gfdfx7pwl", "depends": ["ExperimentHub", "SummarizedExperiment"] }, "spatialLIBD": { "name": "spatialLIBD", "version": "1.21.6", "sha256": "1xh73330za8xsbazii3xx7sh7xdl9y8a1h403xraf7svf521rj97", "depends": ["AnnotationHub", "BiocFileCache", "BiocGenerics", "ComplexHeatmap", "DT", "ExperimentHub", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "S4Vectors", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "benchmarkme", "circlize", "cowplot", "dplyr", "edgeR", "ggplot2", "golem", "jsonlite", "limma", "magick", "paletteer", "plotly", "png", "rlang", "rtracklayer", "scater", "scuttle", "sessioninfo", "shiny", "shinyWidgets", "statmod", "tibble", "viridisLite"] }, "spqnData": { "name": "spqnData", "version": "1.21.0", "sha256": "14zvhhzldg8fzz24xi7c959jv7dh4mn5a7vx2v27f5mh3m548bmv", "depends": ["SummarizedExperiment"] }, "stemHypoxia": { "name": "stemHypoxia", "version": "1.45.0", "sha256": "0i7zay9807hrfz77yhsq9bpkjs2bdw1hcin4qva4g1ysjd8cq5g8", "depends": [] }, "systemPipeRdata": { "name": "systemPipeRdata", "version": "2.13.2", "sha256": "068h2ng4sw2ajpvygrya947mp27kqslkgmyym7344xp994j4p4d8", "depends": ["BiocGenerics", "Biostrings", "jsonlite", "remotes"] }, "tartare": { "name": "tartare", "version": "1.23.0", "sha256": "1agksxc4mkqy0gj6qwdmi5y29rznyq9vwd6y4ghffyvaqz3w0jm2", "depends": ["AnnotationHub", "ExperimentHub"] }, "timecoursedata": { "name": "timecoursedata", "version": "1.19.0", "sha256": "11fih6kmm3i270fjwhbz3i36jfvmdx3afvnj039dbsxin11gd8ln", "depends": ["SummarizedExperiment"] }, "tinesath1cdf": { "name": "tinesath1cdf", "version": "1.47.0", "sha256": "0yg9rn6jjvila5a5cwmgdha83ha45mgkzdh75m7j4r1psdvmiznx", "depends": [] }, "tinesath1probe": { "name": "tinesath1probe", "version": "1.47.0", "sha256": "0dyw19rnjm7733s52njsmllkbrqw7ibzp4mj60jcldy8mh9xm9xx", "depends": ["AnnotationDbi"] }, "tissueTreg": { "name": "tissueTreg", "version": "1.29.0", "sha256": "04k7v9i0gsps0wfkapns42rl0zl0fvx6dvzhs73z2bxpkn3q24mc", "depends": [] }, "tofsimsData": { "name": "tofsimsData", "version": "1.37.0", "sha256": "1qhwl6dgf40lpl58pp49kbyr9g65gkjvrxhzj467q790k3ga5i64", "depends": [] }, "topdownrdata": { "name": "topdownrdata", "version": "1.31.0", "sha256": "05rlifn39nq1ff2wki5xzsblr6yac6vhgsfd9diivpn6l5dv1w2a", "depends": ["topdownr"] }, "tuberculosis": { "name": "tuberculosis", "version": "1.15.1", "sha256": "1lprv2kavhbsm9wi9rdp41smn1bf5rj59z6g774jwyq6mmbr567j", "depends": ["AnnotationHub", "ExperimentHub", "S4Vectors", "SummarizedExperiment", "dplyr", "magrittr", "purrr", "rlang", "stringr", "tibble", "tidyr"] }, "tweeDEseqCountData": { "name": "tweeDEseqCountData", "version": "1.47.0", "sha256": "1gq0cnk9zv6z6id75pj4g8jrl48mripxzy651jkkka4mnbmcx6ar", "depends": ["Biobase"] }, "tximportData": { "name": "tximportData", "version": "1.37.5", "sha256": "1dpk1hy5cdkii31v7g4vw6sjcrfk019vzga8c50cbcvkrvxzqp95", "depends": [] }, "vulcandata": { "name": "vulcandata", "version": "1.31.0", "sha256": "0pswa067hynpq2cidjykd9rf55kq82rc58qh8w4cw5jslgn49j1v", "depends": [] }, "xcoredata": { "name": "xcoredata", "version": "1.13.0", "sha256": "1a358ykmyh6gpf4p3gjl18c85716kk49mcsr8jlhq97xj4r0w3h7", "depends": ["ExperimentHub"] }, "yeastCC": { "name": "yeastCC", "version": "1.49.0", "sha256": "1yrnamb3zsk871lmf1vx7gnnm4bfh0qa0vn3iyhzbsvc83gsyrkn", "depends": ["Biobase"] }, "yeastExpData": { "name": "yeastExpData", "version": "0.55.0", "sha256": "1fkdx452c8qq6s331x987lxab3iha8gbfayms0wnf7fhxl01h2ky", "depends": ["graph"] }, "yeastGSData": { "name": "yeastGSData", "version": "0.47.0", "sha256": "1yljjiai4kd99aamh4vamjgprrjnnad9zai66bqhxba76nba5a7f", "depends": [] }, "yeastNagalakshmi": { "name": "yeastNagalakshmi", "version": "1.45.0", "sha256": "12cgkjq8dxk5nfsaj20hh3pdgp87d7kb4d2pgjhgnacprk0xdbwf", "depends": [] }, "yeastRNASeq": { "name": "yeastRNASeq", "version": "0.47.0", "sha256": "0d4iik1wphm7j2sm4vkca3cj6cd8kqwycspi2f9pjpp5w11fl3w0", "depends": [] }, "zebrafishRNASeq": { "name": "zebrafishRNASeq", "version": "1.29.0", "sha256": "1qrawxxw4ffly8jyrc91r4qsbsvn4wn77dzn47x3m42ap2yjqmmc", "depends": [] }, "ABAData": { "name": "ABAData", "version": "1.0.0", "sha256": "1p2q03c87ilwfz7gbypkfi0n3m9m3c4z6ci9b5v4pr46q4ppl7s9", "depends": [], "broken": true }, "ChIC_data": { "name": "ChIC.data", "version": "1.22.0", "sha256": "1akqpqw9ydf23whr346psciyyp9c3r0rsas1rkdkf8g5wrcj9vhk", "depends": ["caret", "genomeIntervals", "randomForest"], "broken": true }, "CopyNumber450kData": { "name": "CopyNumber450kData", "version": "1.6.0", "sha256": "1scg0mij4rpgb4sfk7fzrd3yxryglnj94gv5dgj6k2gw1551xiyh", "depends": ["IlluminaHumanMethylation450kanno_ilmn12_hg19", "IlluminaHumanMethylation450kmanifest", "minfi"], "broken": true }, "DREAM4": { "name": "DREAM4", "version": "1.6.0", "sha256": "1plla7jzqarwcanyb2ss330y9ssmrr6ka6fa6040r1z0y64c12qj", "depends": ["SummarizedExperiment"], "broken": true }, "DmelSGI": { "name": "DmelSGI", "version": "1.37.0", "sha256": "023ynaky11cc33ksmq8s77m17rlr45mp33bzrzaqija64z01rgih", "depends": ["TSP", "abind", "gplots", "igraph", "knitr", "limma", "rhdf5"], "broken": true }, "FunciSNP_data": { "name": "FunciSNP.data", "version": "1.6.0", "sha256": "15f3b6p5gr25pfrnzsd90w9dnajryia66scpd4jfrws8jagccszq", "depends": ["IRanges", "rtracklayer"], "broken": true }, "GGdata": { "name": "GGdata", "version": "1.8.0", "sha256": "1r2kshwi8iajk0rwzkccdw389ffvkzivg82f4bri3xw0sq57fm50", "depends": ["AnnotationDbi", "Biobase", "GGBase", "illuminaHumanv1_db", "snpStats"], "broken": true }, "MAQCsubsetAFX": { "name": "MAQCsubsetAFX", "version": "1.8.0", "sha256": "0kp9p51v0c3025d74gx64qpyxhgc0rrdp5li0x2jvihyjgd1wz4r", "depends": ["Biobase", "affy"], "broken": true }, "MAQCsubsetILM": { "name": "MAQCsubsetILM", "version": "1.8.0", "sha256": "0a9mihv039f45n6h8isc834nmckcxhailah5lqmgca6lz7hclnpf", "depends": ["Biobase", "lumi"], "broken": true }, "MEALData": { "name": "MEALData", "version": "1.0.0", "sha256": "19k7fppx41v3lwrbm13d9wni7z1hjaxms14aap00ffwpwzs6f0z5", "depends": [], "broken": true }, "MIGSAdata": { "name": "MIGSAdata", "version": "1.24.0", "sha256": "1s7fyf8n86a3znacjjs0zf22amw4rlgnvw2idld0np0yz81ggzs2", "depends": [], "broken": true }, "MMAPPR2data": { "name": "MMAPPR2data", "version": "1.18.0", "sha256": "0rbi0psjwk0jgjpliv0hhjvq9wmwb8w4wgqw45wqba6qfpm70wya", "depends": ["Rsamtools"], "broken": true }, "MSBdata": { "name": "MSBdata", "version": "0.8.0", "sha256": "10yngdppq6706jmvd8i00l01mva8757aavfmz8mmvcyi5cggz200", "depends": [], "broken": true }, "MSstatsBioData": { "name": "MSstatsBioData", "version": "1.13.0", "sha256": "1jzypgfmd6d0fdj9ycp4jwihjpxyinr5kwi2x2dg2z6hvxx97gb8", "depends": [], "broken": true }, "MetaGxOvarian": { "name": "MetaGxOvarian", "version": "1.27.0", "sha256": "0p748si4axvdslb487y240y2c4ap7mpyvr9z1s5849fn3zi05pgj", "depends": ["AnnotationHub", "Biobase", "ExperimentHub", "SummarizedExperiment", "impute", "lattice"], "broken": true }, "Mulder2012": { "name": "Mulder2012", "version": "0.10.0", "sha256": "1dlk8nrvpfk4byii5yssss016yz3qc8ndldgj44p97bqs4nfnjb4", "depends": ["HTSanalyzeR", "KEGG_db", "MASS", "PANR", "RedeR", "igraph", "org_Hs_eg_db", "pvclust"], "broken": true }, "RIPSeekerData": { "name": "RIPSeekerData", "version": "1.6.0", "sha256": "1z0dbjid7fj9zixi3nyx9cjzmxhc684wsfglkd937a248s7f402f", "depends": ["RIPSeeker"], "broken": true }, "RLHub": { "name": "RLHub", "version": "1.9.0", "sha256": "0hm3wplzmmzsygz8dalwf6y798p4g2bssjdsg51w17s2mgm4hl98", "depends": ["AnnotationHub", "ExperimentHub"], "broken": true }, "RNASeqRData": { "name": "RNASeqRData", "version": "1.16.0", "sha256": "17c5fvyqxdsg7wl0hy0i28z0kf2lmjg36lfrmsv51kzklsc6ykrp", "depends": [], "broken": true }, "RNAinteractMAPK": { "name": "RNAinteractMAPK", "version": "1.41.0", "sha256": "0dfxy6hhcwx8xd4c2a02v41dnrrj97lg7ddl4pfn492rk4qvd4s6", "depends": ["Biobase", "MASS", "fields", "gdata", "genefilter", "lattice", "sparseLDA"], "broken": true }, "RnaSeqTutorial": { "name": "RnaSeqTutorial", "version": "0.8.0", "sha256": "0xqzzrgw759kh9had1iav2ffvvdbpf83f8wvpxwb3djpikaxh8s7", "depends": ["easyRNASeq"], "broken": true }, "SCATEData": { "name": "SCATEData", "version": "1.10.0", "sha256": "0p0y8mkcg99dpwvp7spxx047kyr7mdflnnlfpb4i232q0yxz2z03", "depends": ["ExperimentHub", "GenomicAlignments", "GenomicRanges"], "broken": true }, "alpineData": { "name": "alpineData", "version": "1.26.0", "sha256": "1337y1y8q5y8yh2r2bji8fz3nhcxbn5s6pfnnkb8kvg8r0avgmkz", "depends": ["AnnotationHub", "ExperimentHub", "GenomicAlignments"], "broken": true }, "benchmarkfdrData2019": { "name": "benchmarkfdrData2019", "version": "1.21.0", "sha256": "1dpf3d3rdxvadd6mccw0s6v973ip34ljaj3s22p9ns732pwx43wq", "depends": ["ExperimentHub", "SummarizedExperiment"], "broken": true }, "brainImageRdata": { "name": "brainImageRdata", "version": "1.12.0", "sha256": "072x7yn1ambf6hfpir6qdxl8bybv64blpbi1jdp0bvqlk66zs7zv", "depends": ["ExperimentHub"], "broken": true }, "ccTutorial": { "name": "ccTutorial", "version": "1.8.0", "sha256": "0lvsl9127djdrkpk5c4n570sr06yj5x24lfbhrvy4jk8qa4g1qx3", "depends": ["Biobase", "Ringo", "affy", "topGO"], "broken": true }, "ceu1kg": { "name": "ceu1kg", "version": "0.8.0", "sha256": "1cm2myjmrn2kiwgfjpkslz0s6l8qvs8g3y0jbfckp31sd1211kkh", "depends": ["Biobase", "GGBase", "GGtools"], "broken": true }, "ceu1kgv": { "name": "ceu1kgv", "version": "0.12.0", "sha256": "165qp5cfs87ds7sx525fpj5cwisl4520b911l0xxmgcvhz6gjyi5", "depends": ["Biobase", "GGBase"], "broken": true }, "ceuhm3": { "name": "ceuhm3", "version": "0.8.0", "sha256": "10plz831m2vynwn5x4kh93iwcwkn6x39q9qg25lvlrj8j3mqgjmg", "depends": ["Biobase", "GGBase", "GGtools"], "broken": true }, "cgdv17": { "name": "cgdv17", "version": "0.8.0", "sha256": "0wjx4072gpsv6w1x7d5q0qya0ism5xw13zl8d1m49jhszk2kns1j", "depends": ["Biobase", "BiocGenerics", "GenomicRanges", "IRanges", "S4Vectors", "VariantAnnotation"], "broken": true }, "charmData": { "name": "charmData", "version": "1.6.0", "sha256": "0qy3dcx745diza5xy6f1qipnnawqx20vp6p0piy9wvwvgalcx886", "depends": ["charm", "pd_charm_hg18_example"], "broken": true }, "cheung2010": { "name": "cheung2010", "version": "0.8.0", "sha256": "0qrq5k8gpsvqv5vhq67lgql69x7gqsqyfrs87ih8jir1nhgyrmzy", "depends": ["AnnotationDbi", "Biobase", "GGtools", "GenomicRanges", "hgfocus_db"], "broken": true }, "curatedCRCData": { "name": "curatedCRCData", "version": "2.2.0", "sha256": "0p4jgmg3234siglzf1klzq70vgrsnxcz4w2fw16h34m7jkrhiqas", "depends": ["BiocGenerics", "nlme"], "broken": true }, "dsQTL": { "name": "dsQTL", "version": "0.8.0", "sha256": "0qh73b5xbrcdmp3kszykiqiha8s40r0npsajc1h0m7xh26b81d90", "depends": ["Biobase", "GGBase", "SummarizedExperiment"], "broken": true }, "encoDnaseI": { "name": "encoDnaseI", "version": "0.8.0", "sha256": "1n6n5jfaqh1gr19grvxkpbs30314s524wfy6ppfqczxw00yrsvqk", "depends": ["Biobase", "GGBase", "GGtools", "lattice"], "broken": true }, "facopy_annot": { "name": "facopy.annot", "version": "0.104.0", "sha256": "139wd2w7mmrwi69h5mlf73zs3zaqr0kcjv116pd2r7b1dryla9y5", "depends": [], "broken": true }, "facsDorit": { "name": "facsDorit", "version": "1.12.0", "sha256": "0dlbjvzalixpxcxwls6wrlzz4lrmsxs23g1yvin940al9hli612d", "depends": ["prada"], "broken": true }, "flowFitExampleData": { "name": "flowFitExampleData", "version": "1.6.0", "sha256": "0ngq0khy7f7w41mj89fdrrd5lpxznnxg53x6zfgc6mx0vm1q13ak", "depends": ["flowCore"], "broken": true }, "gatingMLData": { "name": "gatingMLData", "version": "2.10.0", "sha256": "1ql5s1p4phhcc9lh3knrgnazkpxlxhvwpvxi0d978g6mjlbbprs2", "depends": [], "broken": true }, "geuvPack": { "name": "geuvPack", "version": "1.2.0", "sha256": "17wy3fkwq16kg3zcm30b06p0a6xwpjbjqrd2rz42ypw7d7danc3h", "depends": ["SummarizedExperiment"], "broken": true }, "geuvStore": { "name": "geuvStore", "version": "1.2.0", "sha256": "14xm3d808mzbvjliazn2rzz9l98b44h4x4s50ass2mfr470k79fs", "depends": ["BatchJobs", "GenomicRanges", "gQTLBase"], "broken": true }, "ggtut": { "name": "ggtut", "version": "0.7.0", "sha256": "0vpqzanzx3mwaz0dz29s5k9l0nly004sn3f5rjx7z8ww67ka4ii6", "depends": ["ChIPpeakAnno", "GGdata", "GGtools", "GenomicFeatures", "GenomicRanges", "Rsamtools", "SNPlocs_Hsapiens_dbSNP_20120608", "cheung2010", "ff", "hmyriB36", "snpStats"], "broken": true }, "gskb": { "name": "gskb", "version": "1.2.0", "sha256": "0b2vd4vn1khk4cd3pdcxwbd26srk3w3zdlk864vhgha5n9wb89kb", "depends": [], "broken": true }, "hmyriB36": { "name": "hmyriB36", "version": "1.6.0", "sha256": "033afw26ng2vc0fj3ipljmrq8vm0q5nbr7gh78i5vmpnkh4d5wgp", "depends": ["Biobase", "GGBase"], "broken": true }, "ind1KG": { "name": "ind1KG", "version": "0.8.0", "sha256": "10yiqj0c4vclblblkr0hwair1hyyrlp5z81y72vcjgv4wkfmxsbk", "depends": ["chopsticks"], "broken": true }, "iontreeData": { "name": "iontreeData", "version": "1.6.0", "sha256": "1bl2f2kk930bry8ibl3234s3ijszxfm0xhcqjay771xcfhf9c14q", "depends": [], "broken": true }, "mAPKLData": { "name": "mAPKLData", "version": "1.2.0", "sha256": "03x2yzpr6xr19k7kk52x6zlpjkfjhhfly1xsvdijrma6dc0rzg8a", "depends": [], "broken": true }, "mitoODEdata": { "name": "mitoODEdata", "version": "1.6.0", "sha256": "07dpak6jdw7mz5jjnysyg82wikjxnk8z4wngfhdfzl0wxg23pbzx", "depends": [], "broken": true }, "parathyroidSE": { "name": "parathyroidSE", "version": "1.46.0", "sha256": "1mdjg7k943kjpzy33gdbbi05g466mms95gpjighicifcxxqbx7ns", "depends": ["SummarizedExperiment"], "broken": true }, "pcaGoPromoter_Hs_hg19": { "name": "pcaGoPromoter.Hs.hg19", "version": "1.6.0", "sha256": "1kzl95mw08162widlycg3g1230c2dsf3cbvai1pb6sc4s1sb5m1k", "depends": [], "broken": true }, "pcaGoPromoter_Mm_mm9": { "name": "pcaGoPromoter.Mm.mm9", "version": "1.6.0", "sha256": "0h6yg6glzsncq7k72vn3l8gxihs3r3kq7420c0sqbp2pljkcycn7", "depends": [], "broken": true }, "pcaGoPromoter_Rn_rn4": { "name": "pcaGoPromoter.Rn.rn4", "version": "1.6.0", "sha256": "087fq848yyq5vl1sv5984qwbjk7navdx82gqwq4446035cv409x5", "depends": [], "broken": true }, "pcxnData": { "name": "pcxnData", "version": "2.25.0", "sha256": "1mlqkxlkqfb8x5jp2fdx5nfrpfh8g3lghfj6sqkaf958n5yl1dg3", "depends": [], "broken": true }, "plasFIA": { "name": "plasFIA", "version": "1.26.0", "sha256": "0vbqjbfc75pb2gk49sl6aihmvcc38ylngyr1bgdvdxr0xh11imv0", "depends": ["proFIA"], "broken": true }, "ppiData": { "name": "ppiData", "version": "0.8.0", "sha256": "09f14jlrbc9pqna1a5lhd9l32m4jhjgghhdczlc7kni75mzsb7ii", "depends": ["AnnotationDbi", "graph"], "broken": true }, "pwrEWAS_data": { "name": "pwrEWAS.data", "version": "1.14.0", "sha256": "1bldyvjsv5wwzasg9sbsivyi7m2ypc17mqjglsl22fjkykm92h4s", "depends": ["ExperimentHub"], "broken": true }, "restfulSEData": { "name": "restfulSEData", "version": "1.26.0", "sha256": "17ia2d5g0zawfpcqvpncw05qshhn09p05j2frxmz0mwjfp7mya27", "depends": ["DelayedArray", "ExperimentHub", "HDF5Array", "SummarizedExperiment"], "broken": true }, "seqCNA_annot": { "name": "seqCNA.annot", "version": "1.6.0", "sha256": "1avgc0qm26r18pxrdm3fp2wrqzcapind4cb88d4z4v2gmp8y04sh", "depends": [], "broken": true }, "stjudem": { "name": "stjudem", "version": "1.10.0", "sha256": "18k39mj374c2lfvjkvnzmm2phnisq8dxmsg0jgarzwqxc6740xak", "depends": [], "broken": true }, "synapterdata": { "name": "synapterdata", "version": "1.46.0", "sha256": "0jhqwwrqcq2g1iwpfwac08b0ir2ipm8bcdx6p8vma982pcb9hs8z", "depends": ["synapter"], "broken": true }, "tcgaWGBSData_hg19": { "name": "tcgaWGBSData.hg19", "version": "1.12.0", "sha256": "1kmh4iyh2h7vc1mlwb3sridn4nwkqdschz5md5dk53mxkn2wxcmi", "depends": ["bsseq", "ExperimentHub", "knitr"], "broken": true }, "waveTilingData": { "name": "waveTilingData", "version": "1.6.0", "sha256": "0xx60f6gvcqvj6m5wqh7mjcf0skbzz5w5bchcalmhgy56l7229a1", "depends": [], "broken": true }, "yri1kgv": { "name": "yri1kgv", "version": "0.12.0", "sha256": "07lmji9sljscwqd96bcllwc3hqzrl8mwj9z7fc6kjaam491iz09f", "depends": ["Biobase", "GGBase"], "broken": true } } }