tjh.dev
1{ lib
2, buildPythonPackage
3, fetchFromGitHub
4, pythonOlder
5, pytestCheckHook
6, pythonRelaxDepsHook
7, poetry-core
8, jsonschema
9, numpy
10, pydicom
11, simpleitk
12}:
13
14buildPythonPackage rec {
15 pname = "pydicom-seg";
16 version = "0.4.1";
17 format = "pyproject";
18
19 disabled = pythonOlder "3.7";
20
21 src = fetchFromGitHub {
22 owner = "razorx89";
23 repo = pname;
24 rev = "refs/tags/v${version}";
25 hash = "sha256-2Y3fZHKfZqdp5EU8HfVsmJ5JFfVGZuAR7+Kj7qaTiPM=";
26 fetchSubmodules = true;
27 };
28
29 postPatch = ''
30 substituteInPlace pyproject.toml \
31 --replace "poetry.masonry.api" "poetry.core.masonry.api"
32 '';
33
34 pythonRelaxDeps = [
35 "jsonschema"
36 ];
37
38 nativeBuildInputs = [
39 poetry-core
40 pythonRelaxDepsHook
41 ];
42
43 propagatedBuildInputs = [
44 jsonschema
45 numpy
46 pydicom
47 simpleitk
48 ];
49
50 nativeCheckInputs = [
51 pytestCheckHook
52 ];
53
54 pythonImportsCheck = [
55 "pydicom_seg"
56 ];
57
58 meta = with lib; {
59 description = "Medical segmentation file reading and writing";
60 homepage = "https://github.com/razorx89/pydicom-seg";
61 changelog = "https://github.com/razorx89/pydicom-seg/releases/tag/v${version}";
62 license = licenses.mit;
63 maintainers = with maintainers; [ bcdarwin ];
64 };
65}