tjh.dev
Clone of https://github.com/NixOS/nixpkgs.git (to stress-test knotserver)
1{ lib
2, buildDunePackage
3, fetchFromGitHub
4, ppx_deriving
5, bppsuite
6, alcotest
7, angstrom-unix
8, biocaml
9, core
10, gsl
11, lacaml
12, menhir
13, menhirLib
14, printbox-text
15}:
16
17buildDunePackage rec {
18 pname = "phylogenetics";
19 version = "unstable-2022-05-06";
20
21 src = fetchFromGitHub {
22 owner = "biocaml";
23 repo = pname;
24 rev = "cd7c624d0f98e31b02933ca4511b9809b26d35b5";
25 sha256 = "sha256:0w0xyah3hj05hxg1rsa40hhma3dm1cyq0zvnjrihhf22laxap7ga";
26 };
27
28 minimalOCamlVersion = "4.08";
29 duneVersion = "3";
30
31 nativeCheckInputs = [ bppsuite ];
32 checkInputs = [ alcotest ];
33 nativeBuildInputs = [ menhir ];
34 propagatedBuildInputs = [
35 angstrom-unix
36 biocaml
37 core
38 gsl
39 lacaml
40 menhirLib
41 ppx_deriving
42 printbox-text
43 ];
44
45 checkPhase = ''
46 runHook preCheck
47 dune build @app/fulltest
48 runHook postCheck
49 '';
50 doCheck = true;
51
52 meta = with lib; {
53 description = "Algorithms and datastructures for phylogenetics";
54 homepage = "https://github.com/biocaml/phylogenetics";
55 license = licenses.cecill-b;
56 maintainers = [ maintainers.bcdarwin ];
57 mainProgram = "phylosim";
58 };
59}