tjh.dev
1{ lib
2, fetchPypi
3, buildPythonPackage
4, pythonOlder
5, setuptools-scm
6, pytestCheckHook
7}:
8
9buildPythonPackage rec {
10 pname = "screed";
11 version = "1.1.2";
12 disabled = pythonOlder "3.8";
13
14 src = fetchPypi {
15 inherit pname version;
16 hash = "sha256-c0/6eopkUoZJbYlbc2+R1rKYiVbi/UI1gSPZPshRm2o=";
17 };
18
19 nativeBuildInputs = [ setuptools-scm ];
20 SETUPTOOLS_SCM_PRETEND_VERSION = version;
21
22 pythonImportsCheck = [ "screed" ];
23 checkInputs = [ pytestCheckHook ];
24
25 # These tests use the screed CLI and make assumptions on how screed is
26 # installed that break with nix. Can be enabled when upstream is fixed.
27 disabledTests = [
28 "Test_convert_shell"
29 "Test_fa_shell_command"
30 "Test_fq_shell_command"
31 ];
32
33 meta = with lib; {
34 description = "A simple read-only sequence database, designed for short reads";
35 homepage = "https://pypi.org/project/screed/";
36 maintainers = with maintainers; [ luizirber ];
37 license = licenses.bsd3;
38 };
39}