tjh.dev
1{ lib
2, buildPythonPackage
3, fetchFromGitHub
4, looseversion
5, mmtf-python
6, nose
7, numpy
8, pandas
9, pythonRelaxDepsHook
10}:
11
12buildPythonPackage rec {
13 pname = "biopandas";
14 version = "0.4.1";
15 format = "setuptools";
16
17 src = fetchFromGitHub {
18 owner = "BioPandas";
19 repo = "biopandas";
20 rev = "refs/tags/v${version}";
21 hash = "sha256-PRdemBo+bB2xJWmF2NylFTfNwEEo67i6XSaeDAFmQ/c=";
22 };
23
24 nativeBuildInputs = [
25 pythonRelaxDepsHook
26 ];
27
28 pythonRelaxDeps = [
29 "looseversion"
30 ];
31
32 propagatedBuildInputs = [
33 numpy
34 pandas
35 mmtf-python
36 looseversion
37 ];
38
39 nativeCheckInputs = [
40 nose
41 ];
42
43 checkPhase = ''
44 runHook preCheck
45
46 nosetests
47
48 runHook postCheck
49 '';
50
51 pythonImportsCheck = [
52 "biopandas"
53 ];
54
55 meta = {
56 description = "Working with molecular structures in pandas DataFrames";
57 homepage = "https://github.com/BioPandas/biopandas";
58 changelog = "https://github.com/BioPandas/biopandas/releases/tag/${src.rev}";
59 license = lib.licenses.bsd3;
60 maintainers = with lib.maintainers; [ natsukium ];
61 };
62}