tjh.dev
1{
2 lib,
3 buildPythonPackage,
4 dask,
5 fetchPypi,
6 fsspec,
7 lxml,
8 numpy,
9 pytestCheckHook,
10 pythonOlder,
11 zarr,
12}:
13
14buildPythonPackage rec {
15 pname = "tifffile";
16 version = "2024.6.18";
17 format = "setuptools";
18
19 disabled = pythonOlder "3.9";
20
21 src = fetchPypi {
22 inherit pname version;
23 hash = "sha256-V+DSoDS8tih+oxVdhxZQjfrIZEOiV/ZQK1fuf4ozs7Y=";
24 };
25
26 propagatedBuildInputs = [ numpy ];
27
28 nativeCheckInputs = [
29 dask
30 fsspec
31 lxml
32 pytestCheckHook
33 zarr
34 ];
35
36 disabledTests = [
37 # Test require network access
38 "test_class_omexml"
39 "test_write_ome"
40 # Test file is missing
41 "test_write_predictor"
42 "test_issue_imagej_hyperstack_arg"
43 "test_issue_description_overwrite"
44 # AssertionError
45 "test_write_bigtiff"
46 "test_write_imagej_raw"
47 # https://github.com/cgohlke/tifffile/issues/142
48 "test_func_bitorder_decode"
49 # Test file is missing
50 "test_issue_invalid_predictor"
51 ];
52
53 pythonImportsCheck = [ "tifffile" ];
54
55 # flaky, often killed due to OOM or timeout
56 env.SKIP_LARGE = "1";
57
58 meta = with lib; {
59 description = "Read and write image data from and to TIFF files";
60 homepage = "https://github.com/cgohlke/tifffile/";
61 changelog = "https://github.com/cgohlke/tifffile/blob/v${version}/CHANGES.rst";
62 license = licenses.bsd3;
63 maintainers = with maintainers; [ lebastr ];
64 };
65}