tjh.dev
1{
2 lib,
3 buildPythonPackage,
4 fetchFromGitHub,
5 imageio,
6 numpy,
7 pytestCheckHook,
8 pythonOlder,
9 scikit-image,
10 slicerator,
11}:
12
13buildPythonPackage rec {
14 pname = "pims";
15 version = "0.7";
16 format = "setuptools";
17
18 disabled = pythonOlder "3.7";
19
20 src = fetchFromGitHub {
21 owner = "soft-matter";
22 repo = pname;
23 rev = "refs/tags/v${version}";
24 hash = "sha256-3SBZk11w6eTZFmETMRJaYncxY38CYne1KzoF5oRgzuY=";
25 };
26
27 propagatedBuildInputs = [
28 slicerator
29 imageio
30 numpy
31 ];
32
33 nativeCheckInputs = [
34 pytestCheckHook
35 scikit-image
36 ];
37
38 pythonImportsCheck = [ "pims" ];
39
40 pytestFlagsArray = [
41 "-W"
42 "ignore::Warning"
43 ];
44
45 disabledTests = [
46 # NotImplementedError: Do not know how to deal with infinite readers
47 "TestVideo_ImageIO"
48 ];
49
50 disabledTestPaths = [
51 # AssertionError: Tuples differ: (377, 505, 4) != (384, 512, 4)
52 "pims/tests/test_display.py"
53 ];
54
55 meta = with lib; {
56 description = "Module to load video and sequential images in various formats";
57 homepage = "https://github.com/soft-matter/pims";
58 changelog = "https://github.com/soft-matter/pims/releases/tag/v${version}";
59 license = licenses.bsd3;
60 maintainers = [ ];
61 };
62}