tjh.dev
1{
2 lib,
3 buildNimPackage,
4 fetchFromGitHub,
5 versionCheckHook,
6}:
7
8buildNimPackage (finalAttrs: {
9 pname = "mosdepth";
10 version = "0.3.11";
11
12 requiredNimVersion = 1;
13
14 src = fetchFromGitHub {
15 owner = "brentp";
16 repo = "mosdepth";
17 rev = "v${finalAttrs.version}";
18 hash = "sha256-EzzDuzPAyNkL2tFWre86U+kx3SvLPbWto2/vfLdwHGI=";
19 };
20
21 lockFile = ./lock.json;
22
23 nativeBuildInputs = [ versionCheckHook ];
24
25 nimFlags = [ ''--passC:"-Wno-incompatible-pointer-types"'' ];
26
27 doInstallCheck = true;
28
29 meta = with lib; {
30 description = "Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing";
31 mainProgram = "mosdepth";
32 license = licenses.mit;
33 homepage = "https://github.com/brentp/mosdepth";
34 maintainers = with maintainers; [
35 jbedo
36 ehmry
37 ];
38 platforms = platforms.linux;
39 };
40})