tjh.dev
1{
2 config,
3 lib,
4 fetchFromGitHub,
5 zlib,
6 stdenv,
7}:
8stdenv.mkDerivation {
9 pname = "fermi2";
10 version = "0.1-unstable-2021-05-21";
11 src = fetchFromGitHub {
12 owner = "lh3";
13 repo = "fermi2";
14 rev = "cb1410972b2bd330883823116931ae67ead8b30f";
15 hash = "sha256-jDn1OBuGWDMEHI5A3R9meOykEGM6yjItSnUpx36DxgA=";
16 };
17 buildInputs = [ zlib ];
18 makeFlags = [ "CC=${stdenv.cc.targetPrefix}cc" ];
19 installPhase = ''
20 runHook preInstall
21
22 install -Dm755 fermi2 -t $out/bin
23
24 runHook postInstall
25 '';
26 meta = {
27 homepage = "https://github.com/lh3/fermi2";
28 description = "Successor of fermi, a whole genome de novo assembler based on the FMD-index for large genomes";
29 mainProgram = "fermi2";
30 license = lib.licenses.mit;
31 maintainers = with lib.maintainers; [ apraga ];
32 platforms = lib.intersectLists lib.platforms.x86_64 lib.platforms.unix;
33 };
34}