tjh.dev
1{ lib
2, python
3, buildPythonPackage
4, fetchFromGitHub
5, cython
6, tiledb
7, numpy
8, wheel
9, isPy3k
10, setuptools_scm
11, psutil
12}:
13
14buildPythonPackage rec {
15 pname = "tiledb";
16 version = "0.5.6";
17 format = "setuptools";
18
19 src = fetchFromGitHub {
20 owner = "TileDB-Inc";
21 repo = "TileDB-Py";
22 rev = version;
23 sha256 = "0cgm4dhyqay26xmrzlv21ha8qh55m4q3yr338lrv81ngz77zxsvw";
24 };
25
26 nativeBuildInputs = [
27 cython
28 setuptools_scm
29 ];
30
31 buildInputs = [
32 tiledb
33 ];
34
35 propagatedBuildInputs = [
36 numpy
37 wheel # No idea why but it is listed
38 ];
39
40 checkInputs = [
41 psutil
42 ];
43
44 TILEDB_PATH = tiledb;
45
46 SETUPTOOLS_SCM_PRETEND_VERSION = version;
47
48 disabled = !isPy3k; # Not bothering with python2 anymore
49
50 postPatch = ''
51 # Hardcode path to shared object
52 substituteInPlace tiledb/__init__.py --replace \
53 'os.path.join(lib_dir, lib_name)' 'os.path.join("${tiledb}/lib", lib_name)'
54
55 # Disable failing test
56 substituteInPlace tiledb/tests/test_examples.py --replace \
57 "test_docs" "dont_test_docs"
58 '';
59
60 checkPhase = ''
61 pushd "$out"
62 ${python.interpreter} -m unittest tiledb.tests.all.suite_test
63 popd
64 '';
65
66 meta = with lib; {
67 description = "Python interface to the TileDB storage manager";
68 homepage = https://github.com/TileDB-Inc/TileDB-Py;
69 license = licenses.mit;
70 maintainers = with maintainers; [ fridh ];
71 };
72
73}