tjh.dev
1{ lib
2, pkgs
3, buildPythonPackage
4, fetchFromGitHub
5, pytest
6}:
7
8buildPythonPackage rec {
9 pname = "DendroPy";
10 version = "4.4.0";
11
12 # tests are incorrectly packaged in pypi version
13 src = fetchFromGitHub {
14 owner = "jeetsukumaran";
15 repo = pname;
16 rev = "v${version}";
17 sha256 = "097hfyv2kaf4x92i4rjx0paw2cncxap48qivv8zxng4z7nhid0x9";
18 };
19
20 preCheck = ''
21 # Needed for unicode python tests
22 export LC_ALL="en_US.UTF-8"
23 cd tests # to find the 'support' module
24 '';
25
26 checkInputs = [ pytest pkgs.glibcLocales ];
27
28 checkPhase = ''
29 pytest -k 'not test_dataio_nexml_reader_tree_list and not test_pscores_with'
30 '';
31
32 meta = {
33 homepage = https://dendropy.org/;
34 description = "A Python library for phylogenetic computing";
35 maintainers = with lib.maintainers; [ unode ];
36 license = lib.licenses.bsd3;
37 };
38}