pyrox.dev
1{ stdenv, fetchurl, python, buildPythonPackage
2, cython, bzip2, lzo, numpy, numexpr, hdf5 }:
3
4buildPythonPackage rec {
5 version = "3.1.1";
6 name = "tables-${version}";
7
8 src = fetchurl {
9 url = "mirror://sourceforge/pytables/${name}.tar.gz";
10 sha256 = "18rdzv9xwiapb5c8y47rk2fi3fdm2dpjf68wfycma67ifrih7f9r";
11 };
12
13 buildInputs = [ hdf5 cython bzip2 lzo ];
14 propagatedBuildInputs = [ numpy numexpr ];
15
16 # The setup script complains about missing run-paths, but they are
17 # actually set.
18 setupPyBuildFlags =
19 [ "--hdf5=${hdf5}"
20 "--lzo=${lzo}"
21 "--bzip2=${bzip2}"
22 ];
23 setupPyInstallFlags = setupPyBuildFlags;
24
25 # Run the test suite.
26 # It requires the build path to be in the python search path.
27 # These tests take quite some time.
28 # If the hdf5 library is built with zlib then there is only one
29 # test-failure. That is the same failure as described in the following
30 # github issue:
31 # https://github.com/PyTables/PyTables/issues/269
32 checkPhase = ''
33 ${python}/bin/${python.executable} <<EOF
34 import sysconfig
35 import sys
36 import os
37 f = "lib.{platform}-{version[0]}.{version[1]}"
38 lib = f.format(platform=sysconfig.get_platform(),
39 version=sys.version_info)
40 build = os.path.join(os.getcwd(), 'build', lib)
41 sys.path.insert(0, build)
42 import tables
43 r = tables.test()
44 if not r.wasSuccessful():
45 sys.exit(1)
46 EOF
47 '';
48
49 # Disable tests until the failure described above is fixed.
50 doCheck = false;
51
52 meta = {
53 description = "Hierarchical datasets for Python";
54 homepage = "http://www.pytables.org/";
55 license = stdenv.lib.licenses.bsd2;
56 };
57}