pyrox.dev
1{ lib
2, buildPythonPackage
3, fetchPypi
4, pythonOlder
5, pytestCheckHook
6, pythonRelaxDepsHook
7, matplotlib
8, nibabel
9, numpy
10, pydicom
11, pymedio
12, scikit-fuzzy
13, scikit-image
14, scikit-learn
15, scipy
16, simpleitk
17, statsmodels
18}:
19
20buildPythonPackage rec {
21 pname = "intensity-normalization";
22 version = "2.2.4";
23 format = "setuptools";
24
25 disabled = pythonOlder "3.6";
26
27 src = fetchPypi {
28 pname = "intensity_normalization";
29 inherit version;
30 hash = "sha256-s/trDIRoqLFj3NO+iv3E+AEB4grBAHDlEL6+TCdsgmg=";
31 };
32
33 postPatch = ''
34 substituteInPlace setup.cfg --replace "!=3.10.*," "" --replace "!=3.11.*" ""
35 substituteInPlace setup.cfg --replace "pytest-runner" ""
36 '';
37
38 nativeBuildInputs = [ pythonRelaxDepsHook ];
39 pythonRelaxDeps = [ "nibabel" ];
40
41 propagatedBuildInputs = [
42 matplotlib
43 nibabel
44 numpy
45 pydicom
46 pymedio
47 scikit-fuzzy
48 scikit-image
49 scikit-learn
50 scipy
51 simpleitk
52 statsmodels
53 ];
54
55 nativeCheckInputs = [
56 pytestCheckHook
57 ];
58 pytestFlagsArray = [ "tests" ];
59
60 pythonImportsCheck = [
61 "intensity_normalization"
62 "intensity_normalization.normalize"
63 "intensity_normalization.plot"
64 "intensity_normalization.util"
65 ];
66
67
68 meta = with lib; {
69 homepage = "https://github.com/jcreinhold/intensity-normalization";
70 description = "MRI intensity normalization tools";
71 maintainers = with maintainers; [ bcdarwin ];
72 license = licenses.asl20;
73 };
74}