pyrox.dev
1{ lib
2, buildPythonPackage
3, fetchFromGitHub
4, numpy
5, scipy
6, pytestCheckHook
7, pytest-timeout
8, h5py
9, matplotlib
10, nibabel
11, pandas
12, scikit-learn
13, decorator
14, jinja2
15, pooch
16, tqdm
17, setuptools
18, pythonOlder
19}:
20
21buildPythonPackage rec {
22 pname = "mne-python";
23 version = "1.2.2";
24 format = "setuptools";
25
26 disabled = pythonOlder "3.7";
27
28 src = fetchFromGitHub {
29 owner = "mne-tools";
30 repo = pname;
31 rev = "refs/tags/v${version}";
32 hash = "sha256-KFifnu9MR3FoVs7gLv+CpB/p3/6Iej9RJuBf1uc1HJs=";
33 };
34
35 propagatedBuildInputs = [
36 decorator
37 jinja2
38 matplotlib
39 numpy
40 pooch
41 scipy
42 setuptools
43 tqdm
44 ];
45
46 checkInputs = [
47 h5py
48 nibabel
49 pandas
50 pytestCheckHook
51 scikit-learn
52 pytest-timeout
53 ];
54
55 preCheck = ''
56 export HOME=$TMP
57 export MNE_SKIP_TESTING_DATASET_TESTS=true
58 export MNE_SKIP_NETWORK_TESTS=1
59 '';
60
61 # All tests pass, but Pytest hangs afterwards - probably some thread hasn't terminated
62 doCheck = false;
63
64 pythonImportsCheck = [
65 "mne"
66 ];
67
68 meta = with lib; {
69 description = "Magnetoencephelography and electroencephalography in Python";
70 homepage = "https://mne.tools";
71 license = licenses.bsd3;
72 maintainers = with maintainers; [ bcdarwin ];
73 };
74}