pyrox.dev
1{ lib
2, buildPythonPackage
3, fetchFromGitHub
4, isPy27
5, packaging
6, pytest
7, cython
8, numpy
9, scipy
10, h5py
11, nibabel
12, tqdm
13}:
14
15buildPythonPackage rec {
16 pname = "dipy";
17 version = "1.4.1";
18
19 disabled = isPy27;
20
21 src = fetchFromGitHub {
22 owner = "dipy";
23 repo = pname;
24 rev = version;
25 sha256 = "0zaqsiq73vprbqbzvzswjfmqgappl5vhpl2fwjrrda33c27klpzj";
26 };
27
28 nativeBuildInputs = [ cython packaging ];
29 propagatedBuildInputs = [
30 numpy
31 scipy
32 h5py
33 nibabel
34 tqdm
35 ];
36
37 checkInputs = [ pytest ];
38
39 # disable tests for now due to:
40 # - some tests require data download (see dipy/dipy/issues/2092);
41 # - running the tests manually causes a multiprocessing hang;
42 # - import weirdness when running the tests
43 doCheck = false;
44
45 pythonImportsCheck = [
46 "dipy"
47 "dipy.core"
48 "dipy.direction"
49 "dipy.tracking"
50 "dipy.reconst"
51 "dipy.io"
52 "dipy.viz"
53 "dipy.boots"
54 "dipy.data"
55 "dipy.utils"
56 "dipy.segment"
57 "dipy.sims"
58 "dipy.stats"
59 "dipy.denoise"
60 "dipy.workflows"
61 "dipy.nn"
62 ];
63
64 meta = with lib; {
65 homepage = "https://dipy.org/";
66 description = "Diffusion imaging toolkit for Python";
67 license = licenses.bsd3;
68 maintainers = with maintainers; [ bcdarwin ];
69 };
70}