Distances on Directed Graphs in R
mpadge.tngl.sh
1// Generated by using Rcpp::compileAttributes() -> do not edit by hand
2// Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393
3
4#include <RcppThread.h>
5#include <Rcpp.h>
6
7using namespace Rcpp;
8
9#ifdef RCPP_USE_GLOBAL_ROSTREAM
10Rcpp::Rostream<true>& Rcpp::Rcout = Rcpp::Rcpp_cout_get();
11Rcpp::Rostream<false>& Rcpp::Rcerr = Rcpp::Rcpp_cerr_get();
12#endif
13
14// rcpp_centrality
15Rcpp::NumericVector rcpp_centrality(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, const std::string& heap_type, const double dist_threshold, const bool edge_centrality, const int sample);
16RcppExport SEXP _dodgr_rcpp_centrality(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP heap_typeSEXP, SEXP dist_thresholdSEXP, SEXP edge_centralitySEXP, SEXP sampleSEXP) {
17BEGIN_RCPP
18 Rcpp::RObject rcpp_result_gen;
19 Rcpp::RNGScope rcpp_rngScope_gen;
20 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
21 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
22 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
23 Rcpp::traits::input_parameter< const double >::type dist_threshold(dist_thresholdSEXP);
24 Rcpp::traits::input_parameter< const bool >::type edge_centrality(edge_centralitySEXP);
25 Rcpp::traits::input_parameter< const int >::type sample(sampleSEXP);
26 rcpp_result_gen = Rcpp::wrap(rcpp_centrality(graph, vert_map_in, heap_type, dist_threshold, edge_centrality, sample));
27 return rcpp_result_gen;
28END_RCPP
29}
30// rcpp_concaveman
31Rcpp::DataFrame rcpp_concaveman(Rcpp::DataFrame xy, Rcpp::NumericVector hull_in, const double concavity, const double length_threshold);
32RcppExport SEXP _dodgr_rcpp_concaveman(SEXP xySEXP, SEXP hull_inSEXP, SEXP concavitySEXP, SEXP length_thresholdSEXP) {
33BEGIN_RCPP
34 Rcpp::RObject rcpp_result_gen;
35 Rcpp::RNGScope rcpp_rngScope_gen;
36 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type xy(xySEXP);
37 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type hull_in(hull_inSEXP);
38 Rcpp::traits::input_parameter< const double >::type concavity(concavitySEXP);
39 Rcpp::traits::input_parameter< const double >::type length_threshold(length_thresholdSEXP);
40 rcpp_result_gen = Rcpp::wrap(rcpp_concaveman(xy, hull_in, concavity, length_threshold));
41 return rcpp_result_gen;
42END_RCPP
43}
44// rcpp_deduplicate
45Rcpp::DataFrame rcpp_deduplicate(const Rcpp::DataFrame& graph, const std::string fr_col, const std::string to_col, const std::string d_col, const std::string t_col);
46RcppExport SEXP _dodgr_rcpp_deduplicate(SEXP graphSEXP, SEXP fr_colSEXP, SEXP to_colSEXP, SEXP d_colSEXP, SEXP t_colSEXP) {
47BEGIN_RCPP
48 Rcpp::RObject rcpp_result_gen;
49 Rcpp::RNGScope rcpp_rngScope_gen;
50 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type graph(graphSEXP);
51 Rcpp::traits::input_parameter< const std::string >::type fr_col(fr_colSEXP);
52 Rcpp::traits::input_parameter< const std::string >::type to_col(to_colSEXP);
53 Rcpp::traits::input_parameter< const std::string >::type d_col(d_colSEXP);
54 Rcpp::traits::input_parameter< const std::string >::type t_col(t_colSEXP);
55 rcpp_result_gen = Rcpp::wrap(rcpp_deduplicate(graph, fr_col, to_col, d_col, t_col));
56 return rcpp_result_gen;
57END_RCPP
58}
59// rcpp_aggregate_to_sf
60Rcpp::List rcpp_aggregate_to_sf(const Rcpp::DataFrame& graph_full, const Rcpp::DataFrame& graph_contr, const Rcpp::DataFrame& edge_map);
61RcppExport SEXP _dodgr_rcpp_aggregate_to_sf(SEXP graph_fullSEXP, SEXP graph_contrSEXP, SEXP edge_mapSEXP) {
62BEGIN_RCPP
63 Rcpp::RObject rcpp_result_gen;
64 Rcpp::RNGScope rcpp_rngScope_gen;
65 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type graph_full(graph_fullSEXP);
66 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type graph_contr(graph_contrSEXP);
67 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type edge_map(edge_mapSEXP);
68 rcpp_result_gen = Rcpp::wrap(rcpp_aggregate_to_sf(graph_full, graph_contr, edge_map));
69 return rcpp_result_gen;
70END_RCPP
71}
72// rcpp_flows_aggregate_par
73Rcpp::NumericVector rcpp_flows_aggregate_par(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, Rcpp::NumericMatrix flows, const bool norm_sums, const double tol, const std::string heap_type);
74RcppExport SEXP _dodgr_rcpp_flows_aggregate_par(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP flowsSEXP, SEXP norm_sumsSEXP, SEXP tolSEXP, SEXP heap_typeSEXP) {
75BEGIN_RCPP
76 Rcpp::RObject rcpp_result_gen;
77 Rcpp::RNGScope rcpp_rngScope_gen;
78 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
79 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
80 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
81 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
82 Rcpp::traits::input_parameter< Rcpp::NumericMatrix >::type flows(flowsSEXP);
83 Rcpp::traits::input_parameter< const bool >::type norm_sums(norm_sumsSEXP);
84 Rcpp::traits::input_parameter< const double >::type tol(tolSEXP);
85 Rcpp::traits::input_parameter< const std::string >::type heap_type(heap_typeSEXP);
86 rcpp_result_gen = Rcpp::wrap(rcpp_flows_aggregate_par(graph, vert_map_in, fromi, toi_in, flows, norm_sums, tol, heap_type));
87 return rcpp_result_gen;
88END_RCPP
89}
90// rcpp_flows_aggregate_pairwise
91Rcpp::NumericVector rcpp_flows_aggregate_pairwise(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi, Rcpp::NumericVector flows, const bool norm_sums, const double tol, const std::string heap_type);
92RcppExport SEXP _dodgr_rcpp_flows_aggregate_pairwise(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toiSEXP, SEXP flowsSEXP, SEXP norm_sumsSEXP, SEXP tolSEXP, SEXP heap_typeSEXP) {
93BEGIN_RCPP
94 Rcpp::RObject rcpp_result_gen;
95 Rcpp::RNGScope rcpp_rngScope_gen;
96 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
97 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
98 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
99 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi(toiSEXP);
100 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type flows(flowsSEXP);
101 Rcpp::traits::input_parameter< const bool >::type norm_sums(norm_sumsSEXP);
102 Rcpp::traits::input_parameter< const double >::type tol(tolSEXP);
103 Rcpp::traits::input_parameter< const std::string >::type heap_type(heap_typeSEXP);
104 rcpp_result_gen = Rcpp::wrap(rcpp_flows_aggregate_pairwise(graph, vert_map_in, fromi, toi, flows, norm_sums, tol, heap_type));
105 return rcpp_result_gen;
106END_RCPP
107}
108// rcpp_flows_disperse_par
109Rcpp::NumericVector rcpp_flows_disperse_par(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::NumericVector k, Rcpp::NumericVector dens, const double& tol, std::string heap_type);
110RcppExport SEXP _dodgr_rcpp_flows_disperse_par(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP kSEXP, SEXP densSEXP, SEXP tolSEXP, SEXP heap_typeSEXP) {
111BEGIN_RCPP
112 Rcpp::RObject rcpp_result_gen;
113 Rcpp::RNGScope rcpp_rngScope_gen;
114 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
115 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
116 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
117 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type k(kSEXP);
118 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type dens(densSEXP);
119 Rcpp::traits::input_parameter< const double& >::type tol(tolSEXP);
120 Rcpp::traits::input_parameter< std::string >::type heap_type(heap_typeSEXP);
121 rcpp_result_gen = Rcpp::wrap(rcpp_flows_disperse_par(graph, vert_map_in, fromi, k, dens, tol, heap_type));
122 return rcpp_result_gen;
123END_RCPP
124}
125// rcpp_flows_si
126Rcpp::NumericVector rcpp_flows_si(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, Rcpp::NumericVector kvec, Rcpp::NumericVector dens_from, Rcpp::NumericVector dens_to, const bool norm_sums, const double tol, const std::string heap_type);
127RcppExport SEXP _dodgr_rcpp_flows_si(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP kvecSEXP, SEXP dens_fromSEXP, SEXP dens_toSEXP, SEXP norm_sumsSEXP, SEXP tolSEXP, SEXP heap_typeSEXP) {
128BEGIN_RCPP
129 Rcpp::RObject rcpp_result_gen;
130 Rcpp::RNGScope rcpp_rngScope_gen;
131 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
132 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
133 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
134 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
135 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type kvec(kvecSEXP);
136 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type dens_from(dens_fromSEXP);
137 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type dens_to(dens_toSEXP);
138 Rcpp::traits::input_parameter< const bool >::type norm_sums(norm_sumsSEXP);
139 Rcpp::traits::input_parameter< const double >::type tol(tolSEXP);
140 Rcpp::traits::input_parameter< const std::string >::type heap_type(heap_typeSEXP);
141 rcpp_result_gen = Rcpp::wrap(rcpp_flows_si(graph, vert_map_in, fromi, toi_in, kvec, dens_from, dens_to, norm_sums, tol, heap_type));
142 return rcpp_result_gen;
143END_RCPP
144}
145// rcpp_fundamental_cycles
146Rcpp::List rcpp_fundamental_cycles(Rcpp::DataFrame graph, Rcpp::DataFrame verts);
147RcppExport SEXP _dodgr_rcpp_fundamental_cycles(SEXP graphSEXP, SEXP vertsSEXP) {
148BEGIN_RCPP
149 Rcpp::RObject rcpp_result_gen;
150 Rcpp::RNGScope rcpp_rngScope_gen;
151 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type graph(graphSEXP);
152 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type verts(vertsSEXP);
153 rcpp_result_gen = Rcpp::wrap(rcpp_fundamental_cycles(graph, verts));
154 return rcpp_result_gen;
155END_RCPP
156}
157// rcpp_contract_graph
158Rcpp::List rcpp_contract_graph(const Rcpp::DataFrame& graph, Rcpp::Nullable <Rcpp::StringVector>& vertlist_in);
159RcppExport SEXP _dodgr_rcpp_contract_graph(SEXP graphSEXP, SEXP vertlist_inSEXP) {
160BEGIN_RCPP
161 Rcpp::RObject rcpp_result_gen;
162 Rcpp::RNGScope rcpp_rngScope_gen;
163 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type graph(graphSEXP);
164 Rcpp::traits::input_parameter< Rcpp::Nullable <Rcpp::StringVector>& >::type vertlist_in(vertlist_inSEXP);
165 rcpp_result_gen = Rcpp::wrap(rcpp_contract_graph(graph, vertlist_in));
166 return rcpp_result_gen;
167END_RCPP
168}
169// rcpp_merge_cols
170Rcpp::NumericVector rcpp_merge_cols(Rcpp::DataFrame graph);
171RcppExport SEXP _dodgr_rcpp_merge_cols(SEXP graphSEXP) {
172BEGIN_RCPP
173 Rcpp::RObject rcpp_result_gen;
174 Rcpp::RNGScope rcpp_rngScope_gen;
175 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type graph(graphSEXP);
176 rcpp_result_gen = Rcpp::wrap(rcpp_merge_cols(graph));
177 return rcpp_result_gen;
178END_RCPP
179}
180// rcpp_sample_graph
181Rcpp::StringVector rcpp_sample_graph(Rcpp::DataFrame graph, size_t nverts_to_sample);
182RcppExport SEXP _dodgr_rcpp_sample_graph(SEXP graphSEXP, SEXP nverts_to_sampleSEXP) {
183BEGIN_RCPP
184 Rcpp::RObject rcpp_result_gen;
185 Rcpp::RNGScope rcpp_rngScope_gen;
186 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type graph(graphSEXP);
187 Rcpp::traits::input_parameter< size_t >::type nverts_to_sample(nverts_to_sampleSEXP);
188 rcpp_result_gen = Rcpp::wrap(rcpp_sample_graph(graph, nverts_to_sample));
189 return rcpp_result_gen;
190END_RCPP
191}
192// rcpp_get_component_vector
193Rcpp::List rcpp_get_component_vector(const Rcpp::DataFrame& graph);
194RcppExport SEXP _dodgr_rcpp_get_component_vector(SEXP graphSEXP) {
195BEGIN_RCPP
196 Rcpp::RObject rcpp_result_gen;
197 Rcpp::RNGScope rcpp_rngScope_gen;
198 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type graph(graphSEXP);
199 rcpp_result_gen = Rcpp::wrap(rcpp_get_component_vector(graph));
200 return rcpp_result_gen;
201END_RCPP
202}
203// rcpp_unique_rownames
204Rcpp::DataFrame rcpp_unique_rownames(Rcpp::DataFrame xyfrom, Rcpp::DataFrame xyto, const int precision);
205RcppExport SEXP _dodgr_rcpp_unique_rownames(SEXP xyfromSEXP, SEXP xytoSEXP, SEXP precisionSEXP) {
206BEGIN_RCPP
207 Rcpp::RObject rcpp_result_gen;
208 Rcpp::RNGScope rcpp_rngScope_gen;
209 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type xyfrom(xyfromSEXP);
210 Rcpp::traits::input_parameter< Rcpp::DataFrame >::type xyto(xytoSEXP);
211 Rcpp::traits::input_parameter< const int >::type precision(precisionSEXP);
212 rcpp_result_gen = Rcpp::wrap(rcpp_unique_rownames(xyfrom, xyto, precision));
213 return rcpp_result_gen;
214END_RCPP
215}
216// rcpp_points_index_par
217Rcpp::IntegerVector rcpp_points_index_par(const Rcpp::DataFrame& xy, Rcpp::DataFrame& pts);
218RcppExport SEXP _dodgr_rcpp_points_index_par(SEXP xySEXP, SEXP ptsSEXP) {
219BEGIN_RCPP
220 Rcpp::RObject rcpp_result_gen;
221 Rcpp::RNGScope rcpp_rngScope_gen;
222 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type xy(xySEXP);
223 Rcpp::traits::input_parameter< Rcpp::DataFrame& >::type pts(ptsSEXP);
224 rcpp_result_gen = Rcpp::wrap(rcpp_points_index_par(xy, pts));
225 return rcpp_result_gen;
226END_RCPP
227}
228// rcpp_points_to_edges_par
229Rcpp::NumericVector rcpp_points_to_edges_par(const Rcpp::DataFrame& graph, Rcpp::DataFrame& pts);
230RcppExport SEXP _dodgr_rcpp_points_to_edges_par(SEXP graphSEXP, SEXP ptsSEXP) {
231BEGIN_RCPP
232 Rcpp::RObject rcpp_result_gen;
233 Rcpp::RNGScope rcpp_rngScope_gen;
234 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type graph(graphSEXP);
235 Rcpp::traits::input_parameter< Rcpp::DataFrame& >::type pts(ptsSEXP);
236 rcpp_result_gen = Rcpp::wrap(rcpp_points_to_edges_par(graph, pts));
237 return rcpp_result_gen;
238END_RCPP
239}
240// rcpp_get_sp_dists_par
241Rcpp::NumericMatrix rcpp_get_sp_dists_par(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type, const bool is_spatial);
242RcppExport SEXP _dodgr_rcpp_get_sp_dists_par(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP, SEXP is_spatialSEXP) {
243BEGIN_RCPP
244 Rcpp::RObject rcpp_result_gen;
245 Rcpp::RNGScope rcpp_rngScope_gen;
246 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
247 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
248 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
249 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
250 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
251 Rcpp::traits::input_parameter< const bool >::type is_spatial(is_spatialSEXP);
252 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists_par(graph, vert_map_in, fromi, toi_in, heap_type, is_spatial));
253 return rcpp_result_gen;
254END_RCPP
255}
256// rcpp_get_sp_dists_nearest
257Rcpp::NumericVector rcpp_get_sp_dists_nearest(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type);
258RcppExport SEXP _dodgr_rcpp_get_sp_dists_nearest(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP) {
259BEGIN_RCPP
260 Rcpp::RObject rcpp_result_gen;
261 Rcpp::RNGScope rcpp_rngScope_gen;
262 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
263 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
264 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
265 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
266 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
267 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists_nearest(graph, vert_map_in, fromi, toi_in, heap_type));
268 return rcpp_result_gen;
269END_RCPP
270}
271// rcpp_get_sp_dists_paired_par
272Rcpp::NumericMatrix rcpp_get_sp_dists_paired_par(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi, const std::string& heap_type, const bool is_spatial);
273RcppExport SEXP _dodgr_rcpp_get_sp_dists_paired_par(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toiSEXP, SEXP heap_typeSEXP, SEXP is_spatialSEXP) {
274BEGIN_RCPP
275 Rcpp::RObject rcpp_result_gen;
276 Rcpp::RNGScope rcpp_rngScope_gen;
277 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
278 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
279 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
280 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi(toiSEXP);
281 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
282 Rcpp::traits::input_parameter< const bool >::type is_spatial(is_spatialSEXP);
283 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists_paired_par(graph, vert_map_in, fromi, toi, heap_type, is_spatial));
284 return rcpp_result_gen;
285END_RCPP
286}
287// rcpp_get_iso
288Rcpp::NumericMatrix rcpp_get_iso(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::NumericVector dlim, const std::string& heap_type);
289RcppExport SEXP _dodgr_rcpp_get_iso(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP dlimSEXP, SEXP heap_typeSEXP) {
290BEGIN_RCPP
291 Rcpp::RObject rcpp_result_gen;
292 Rcpp::RNGScope rcpp_rngScope_gen;
293 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
294 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
295 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
296 Rcpp::traits::input_parameter< Rcpp::NumericVector >::type dlim(dlimSEXP);
297 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
298 rcpp_result_gen = Rcpp::wrap(rcpp_get_iso(graph, vert_map_in, fromi, dlim, heap_type));
299 return rcpp_result_gen;
300END_RCPP
301}
302// rcpp_get_sp_dists
303Rcpp::NumericMatrix rcpp_get_sp_dists(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type);
304RcppExport SEXP _dodgr_rcpp_get_sp_dists(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP) {
305BEGIN_RCPP
306 Rcpp::RObject rcpp_result_gen;
307 Rcpp::RNGScope rcpp_rngScope_gen;
308 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
309 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
310 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
311 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
312 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
313 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists(graph, vert_map_in, fromi, toi_in, heap_type));
314 return rcpp_result_gen;
315END_RCPP
316}
317// rcpp_get_paths
318Rcpp::List rcpp_get_paths(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type);
319RcppExport SEXP _dodgr_rcpp_get_paths(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP) {
320BEGIN_RCPP
321 Rcpp::RObject rcpp_result_gen;
322 Rcpp::RNGScope rcpp_rngScope_gen;
323 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
324 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
325 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
326 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
327 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
328 rcpp_result_gen = Rcpp::wrap(rcpp_get_paths(graph, vert_map_in, fromi, toi_in, heap_type));
329 return rcpp_result_gen;
330END_RCPP
331}
332// rcpp_get_paths_pairwise
333Rcpp::List rcpp_get_paths_pairwise(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type);
334RcppExport SEXP _dodgr_rcpp_get_paths_pairwise(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP) {
335BEGIN_RCPP
336 Rcpp::RObject rcpp_result_gen;
337 Rcpp::RNGScope rcpp_rngScope_gen;
338 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
339 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
340 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
341 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
342 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
343 rcpp_result_gen = Rcpp::wrap(rcpp_get_paths_pairwise(graph, vert_map_in, fromi, toi_in, heap_type));
344 return rcpp_result_gen;
345END_RCPP
346}
347// rcpp_get_sp_dists_categorical
348Rcpp::NumericMatrix rcpp_get_sp_dists_categorical(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type, const bool proportions_only);
349RcppExport SEXP _dodgr_rcpp_get_sp_dists_categorical(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP, SEXP proportions_onlySEXP) {
350BEGIN_RCPP
351 Rcpp::RObject rcpp_result_gen;
352 Rcpp::RNGScope rcpp_rngScope_gen;
353 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
354 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
355 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
356 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
357 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
358 Rcpp::traits::input_parameter< const bool >::type proportions_only(proportions_onlySEXP);
359 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists_categorical(graph, vert_map_in, fromi, toi_in, heap_type, proportions_only));
360 return rcpp_result_gen;
361END_RCPP
362}
363// rcpp_get_sp_dists_categ_paired
364Rcpp::NumericMatrix rcpp_get_sp_dists_categ_paired(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, Rcpp::IntegerVector toi_in, const std::string& heap_type);
365RcppExport SEXP _dodgr_rcpp_get_sp_dists_categ_paired(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP toi_inSEXP, SEXP heap_typeSEXP) {
366BEGIN_RCPP
367 Rcpp::RObject rcpp_result_gen;
368 Rcpp::RNGScope rcpp_rngScope_gen;
369 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
370 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
371 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
372 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type toi_in(toi_inSEXP);
373 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
374 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists_categ_paired(graph, vert_map_in, fromi, toi_in, heap_type));
375 return rcpp_result_gen;
376END_RCPP
377}
378// rcpp_get_sp_dists_cat_threshold
379Rcpp::NumericMatrix rcpp_get_sp_dists_cat_threshold(const Rcpp::DataFrame graph, const Rcpp::DataFrame vert_map_in, Rcpp::IntegerVector fromi, const double dlimit, const std::string& heap_type);
380RcppExport SEXP _dodgr_rcpp_get_sp_dists_cat_threshold(SEXP graphSEXP, SEXP vert_map_inSEXP, SEXP fromiSEXP, SEXP dlimitSEXP, SEXP heap_typeSEXP) {
381BEGIN_RCPP
382 Rcpp::RObject rcpp_result_gen;
383 Rcpp::RNGScope rcpp_rngScope_gen;
384 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
385 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type vert_map_in(vert_map_inSEXP);
386 Rcpp::traits::input_parameter< Rcpp::IntegerVector >::type fromi(fromiSEXP);
387 Rcpp::traits::input_parameter< const double >::type dlimit(dlimitSEXP);
388 Rcpp::traits::input_parameter< const std::string& >::type heap_type(heap_typeSEXP);
389 rcpp_result_gen = Rcpp::wrap(rcpp_get_sp_dists_cat_threshold(graph, vert_map_in, fromi, dlimit, heap_type));
390 return rcpp_result_gen;
391END_RCPP
392}
393// rcpp_gen_hash
394Rcpp::CharacterVector rcpp_gen_hash(const int n, const size_t hash_len);
395RcppExport SEXP _dodgr_rcpp_gen_hash(SEXP nSEXP, SEXP hash_lenSEXP) {
396BEGIN_RCPP
397 Rcpp::RObject rcpp_result_gen;
398 Rcpp::RNGScope rcpp_rngScope_gen;
399 Rcpp::traits::input_parameter< const int >::type n(nSEXP);
400 Rcpp::traits::input_parameter< const size_t >::type hash_len(hash_lenSEXP);
401 rcpp_result_gen = Rcpp::wrap(rcpp_gen_hash(n, hash_len));
402 return rcpp_result_gen;
403END_RCPP
404}
405// rcpp_sf_as_network
406Rcpp::List rcpp_sf_as_network(const Rcpp::List& sf_lines, const Rcpp::DataFrame& pr);
407RcppExport SEXP _dodgr_rcpp_sf_as_network(SEXP sf_linesSEXP, SEXP prSEXP) {
408BEGIN_RCPP
409 Rcpp::RObject rcpp_result_gen;
410 Rcpp::RNGScope rcpp_rngScope_gen;
411 Rcpp::traits::input_parameter< const Rcpp::List& >::type sf_lines(sf_linesSEXP);
412 Rcpp::traits::input_parameter< const Rcpp::DataFrame& >::type pr(prSEXP);
413 rcpp_result_gen = Rcpp::wrap(rcpp_sf_as_network(sf_lines, pr));
414 return rcpp_result_gen;
415END_RCPP
416}
417// rcpp_route_times
418Rcpp::List rcpp_route_times(const Rcpp::DataFrame graph, bool left_side, int turn_penalty);
419RcppExport SEXP _dodgr_rcpp_route_times(SEXP graphSEXP, SEXP left_sideSEXP, SEXP turn_penaltySEXP) {
420BEGIN_RCPP
421 Rcpp::RObject rcpp_result_gen;
422 Rcpp::RNGScope rcpp_rngScope_gen;
423 Rcpp::traits::input_parameter< const Rcpp::DataFrame >::type graph(graphSEXP);
424 Rcpp::traits::input_parameter< bool >::type left_side(left_sideSEXP);
425 Rcpp::traits::input_parameter< int >::type turn_penalty(turn_penaltySEXP);
426 rcpp_result_gen = Rcpp::wrap(rcpp_route_times(graph, left_side, turn_penalty));
427 return rcpp_result_gen;
428END_RCPP
429}
430
431static const R_CallMethodDef CallEntries[] = {
432 {"_dodgr_rcpp_centrality", (DL_FUNC) &_dodgr_rcpp_centrality, 6},
433 {"_dodgr_rcpp_concaveman", (DL_FUNC) &_dodgr_rcpp_concaveman, 4},
434 {"_dodgr_rcpp_deduplicate", (DL_FUNC) &_dodgr_rcpp_deduplicate, 5},
435 {"_dodgr_rcpp_aggregate_to_sf", (DL_FUNC) &_dodgr_rcpp_aggregate_to_sf, 3},
436 {"_dodgr_rcpp_flows_aggregate_par", (DL_FUNC) &_dodgr_rcpp_flows_aggregate_par, 8},
437 {"_dodgr_rcpp_flows_aggregate_pairwise", (DL_FUNC) &_dodgr_rcpp_flows_aggregate_pairwise, 8},
438 {"_dodgr_rcpp_flows_disperse_par", (DL_FUNC) &_dodgr_rcpp_flows_disperse_par, 7},
439 {"_dodgr_rcpp_flows_si", (DL_FUNC) &_dodgr_rcpp_flows_si, 10},
440 {"_dodgr_rcpp_fundamental_cycles", (DL_FUNC) &_dodgr_rcpp_fundamental_cycles, 2},
441 {"_dodgr_rcpp_contract_graph", (DL_FUNC) &_dodgr_rcpp_contract_graph, 2},
442 {"_dodgr_rcpp_merge_cols", (DL_FUNC) &_dodgr_rcpp_merge_cols, 1},
443 {"_dodgr_rcpp_sample_graph", (DL_FUNC) &_dodgr_rcpp_sample_graph, 2},
444 {"_dodgr_rcpp_get_component_vector", (DL_FUNC) &_dodgr_rcpp_get_component_vector, 1},
445 {"_dodgr_rcpp_unique_rownames", (DL_FUNC) &_dodgr_rcpp_unique_rownames, 3},
446 {"_dodgr_rcpp_points_index_par", (DL_FUNC) &_dodgr_rcpp_points_index_par, 2},
447 {"_dodgr_rcpp_points_to_edges_par", (DL_FUNC) &_dodgr_rcpp_points_to_edges_par, 2},
448 {"_dodgr_rcpp_get_sp_dists_par", (DL_FUNC) &_dodgr_rcpp_get_sp_dists_par, 6},
449 {"_dodgr_rcpp_get_sp_dists_nearest", (DL_FUNC) &_dodgr_rcpp_get_sp_dists_nearest, 5},
450 {"_dodgr_rcpp_get_sp_dists_paired_par", (DL_FUNC) &_dodgr_rcpp_get_sp_dists_paired_par, 6},
451 {"_dodgr_rcpp_get_iso", (DL_FUNC) &_dodgr_rcpp_get_iso, 5},
452 {"_dodgr_rcpp_get_sp_dists", (DL_FUNC) &_dodgr_rcpp_get_sp_dists, 5},
453 {"_dodgr_rcpp_get_paths", (DL_FUNC) &_dodgr_rcpp_get_paths, 5},
454 {"_dodgr_rcpp_get_paths_pairwise", (DL_FUNC) &_dodgr_rcpp_get_paths_pairwise, 5},
455 {"_dodgr_rcpp_get_sp_dists_categorical", (DL_FUNC) &_dodgr_rcpp_get_sp_dists_categorical, 6},
456 {"_dodgr_rcpp_get_sp_dists_categ_paired", (DL_FUNC) &_dodgr_rcpp_get_sp_dists_categ_paired, 5},
457 {"_dodgr_rcpp_get_sp_dists_cat_threshold", (DL_FUNC) &_dodgr_rcpp_get_sp_dists_cat_threshold, 5},
458 {"_dodgr_rcpp_gen_hash", (DL_FUNC) &_dodgr_rcpp_gen_hash, 2},
459 {"_dodgr_rcpp_sf_as_network", (DL_FUNC) &_dodgr_rcpp_sf_as_network, 2},
460 {"_dodgr_rcpp_route_times", (DL_FUNC) &_dodgr_rcpp_route_times, 3},
461 {NULL, NULL, 0}
462};
463
464RcppExport void R_init_dodgr(DllInfo *dll) {
465 R_registerRoutines(dll, NULL, CallEntries, NULL, NULL);
466 R_useDynamicSymbols(dll, FALSE);
467}