byarielm.fyi / scImmuCC
Hierarchical annotation of immune cells in scRNA-Seq data based on ssGSEA algorithm. Fork for large datasets with QOL improvements.
fork atom
scImmuCC / tests / testthat / Layer2_Tcell_scImmuCC_label.csv
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887"886","CZINY_0059_ACTGTCCCAACGATTC","CD4_T" 888"887","Pan_T7980364_ATTGGTGTCCGCATAA","CD8_T" 889"888","Pan_T7917819_TCGCGTTTCTCTTATG","CD8_T" 890"889","CZINY_0053_AGCGTATTCGAGTGGA","CD4_T" 891"890","CZINY_0062_AAACCCACAACGGGTA","CD4_T" 892"891","CZINY_0052_GCATCTCAGTGCTCAT","CD8_T" 893"892","Pan_T7980370_TAGGCATGTACTCGCG","CD8_T" 894"893","Pan_T7980364_TCTATTGTCACAGTAC","CD8_T" 895"894","Pan_T7991591_TGTGGTACAAGCCATT","CD8_T" 896"895","Pan_T7980364_GCAGTTAGTGCCTGGT","CD8_T" 897"896","Pan_T7980364_GTAGGCCGTGAGCGAT","CD8_T" 898"897","Pan_T7980359_CTTAGGAAGCTGCCCA","CD8_T" 899"898","Pan_T7980364_CATATTCAGCCCGAAA","CD8_T" 900"899","Pan_T7980364_TGCCCATGTTCGGGCT","CD8_T" 901"900","CZINY_0050_GTCGTAAAGGCCTAGA","CD8_T" 902"901","CZINY_0062_AAGCATCAGCTCCCTT","CD8_T"