byarielm.fyi / scImmuCC
Hierarchical annotation of immune cells in scRNA-Seq data based on ssGSEA algorithm. Fork for large datasets with QOL improvements.
fork atom
scImmuCC / tests / testthat / Layer2_DC_scImmuCC_label.csv
at main 17 kB view raw
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293"292","CZINY_0058_TTGGGTACAGCGACCT","cDC" 294"293","CZINY_0061_CTCCCAACAGCGGTCT","pDC" 295"294","Pan_T8986829_GACGTTAGTGTGGTTT","pDC" 296"295","CZINY_0051_TTAGTCTGTAGTCGTT","pDC" 297"296","CZINY_0051_AGGTTGTTCACCATGA","pDC" 298"297","Pan_T7980358_GGGAGATAGTGGTAAT","cDC" 299"298","Pan_T7935492_CTTAGGATCACGACTA","cDC" 300"299","CZINY_0052_GGTCTGGCACAAATAG","pDC" 301"300","CZI_IA10471909_CZI_IA10472005_CGACTTCCAATGAATG","cDC" 302"301","CZINY_0064_CCACGAGCAGCGTTTA","cDC" 303"302","CZINY_0053_CATACTTAGTGGTTCT","cDC" 304"303","CZI_IA9924320_CZI_IA9924368_CGGGTCATCCGAACGC","cDC" 305"304","CZINY_0064_TGTTCATTCCATCTAT","pDC" 306"305","Pan_T8986830_ATTTCTGCATGCAATC","cDC" 307"306","CZI_IA10471912_CZI_IA10472008_GTGGGTCTCTGTCAAG","cDC" 308"307","CZINY_0060_ATGGATCAGGCTCCCA","cDC" 309"308","CZINY_0063_GGTGATTGTGATTGGG","cDC" 310"309","Pan_T8010326_CTAGTGACATGGTTGT","cDC" 311"310","CZINY_0050_CTAACCCGTCGACTGC","pDC" 312"311","CZINY_0110_TCCCATGGTGGTATGG","cDC" 313"312","CZINY_0058_CAACCAAGTACGTGAG","cDC" 314"313","Pan_T7935493_TCTCTAAAGAGTCTGG","pDC" 315"314","Pan_T7935495_ATTATCCAGTCCCACG","cDC" 316"315","Pan_T7991590_ATAGACCAGTGGGATC","pDC" 317"316","CZINY_0064_TCAGCCTGTCGCATGC","pDC" 318"317","CZINY_0059_CATCGTCTCGTTGCCT","cDC" 319"318","CZI_IA10471912_CZI_IA10472008_AAAGATGTCCACTGGG","cDC" 320"319","Pan_T8010330_ACGCCAGGTTGTCGCG","pDC" 321"320","CZINY_0061_GTCTTTAGTATTAAGG","pDC" 322"321","CZI_IA10471911_CZI_IA10472007_CACCTTGTCTAACTTC","cDC" 323"322","CZINY_0055_GAAATGACACCCAATA","pDC" 324"323","CZINY_0051_ACGGAAGGTGGACCTC","pDC" 325"324","CZINY_0062_CTAACTTAGTTGAATG","cDC" 326"325","CZINY_0050_TCCTTCTCAGAGTAAT","cDC" 327"326","CZINY_0049_TCGTGCTAGTCGTCTA","pDC" 328"327","CZINY_0063_CTCCTTTTCTATACGG","cDC" 329"328","CZINY_0051_GGGCTCAAGTCGAATA","cDC" 330"329","CZINY_0061_TGAACGTCACCGGCTA","cDC" 331"330","CZI_IA10471909_CZI_IA10472005_TTGCCGTCAGCTCGAC","pDC" 332"331","CZINY_0054_ATGCGATTCTACTTCA","cDC" 333"332","CZINY_0063_AAAGTCCAGCGACTTT","pDC" 334"333","Pan_T8010330_TGATTTCCACCACCAG","cDC" 335"334","CZINY_0055_ACTGTCCGTATTTCCT","pDC" 336"335","Pan_T7980359_TTGACTTAGATATGGT","cDC" 337"336","CZINY_0058_GGGCTCAGTTCTATCT","cDC" 338"337","CZINY_0055_GGTTAACGTGCTAGCC","pDC" 339"338","CZINY_0059_GTCAGCGAGTCATTGC","pDC" 340"339","Pan_T7935493_TCTCTAAAGTAGCGGT","pDC" 341"340","CZINY_0054_TGAGGTTCAGTTGGTT","pDC" 342"341","Pan_T7980358_GTGGGTCCAATGGAAT","pDC" 343"342","CZINY_0057_TCCCATGAGGTTAAAC","cDC" 344"343","Pan_T7917815_TCATTTGCAGGGTATG","pDC" 345"344","CZINY_0058_TGGGAAGAGGTAAGTT","pDC" 346"345","CZINY_0057_AATGACCGTGAGGCAT","cDC" 347"346","Pan_T7917820_ATCTACTTCCCAGGTG","cDC" 348"347","CZINY_0058_GATCCCTAGCTCCGAC","cDC" 349"348","CZINY_0056_GCCAGTGAGCACGGAT","cDC" 350"349","CZI_IA10471910_CZI_IA10472006_CGATTGATCCACTGGG","cDC" 351"350","CZINY_0054_ATTCCTATCCAACTGA","pDC" 352"351","CZI_IA10471909_CZI_IA10472005_CTTAGGAAGAAGGACA","pDC" 353"352","CZINY_0061_GTGAGGAGTATATGGA","cDC" 354"353","CZI_IA10471913_CZI_IA10472009_CTTCTCTAGGACCACA","cDC" 355"354","Pan_T7980360_GCATGCGCATCTATGG","pDC" 356"355","CZINY_0101_GACTCAAGTATGCTTG","cDC" 357"356","CZINY_0057_GTAATCGAGTGATCGG","pDC" 358"357","Pan_T7991589_TTAACTCAGTCCAGGA","cDC" 359"358","Pan_T7980358_AAAGATGCAGTCGTGC","cDC" 360"359","CZINY_0062_CTGGCAGAGGATTCAA","pDC" 361"360","CZINY_0059_GCACGTGCATACCATG","cDC" 362"361","Pan_T7935495_GGCGTGTAGAAACCAT","pDC" 363"362","CZI_IA10471912_CZI_IA10472008_TTGGAACTCTGGTTCC","cDC" 364"363","CZINY_0063_CGAGGCTCAGTGCGCT","cDC" 365"364","CZINY_0051_TGTCCCAAGAACCGCA","cDC" 366"365","CZI_IA10466283_CZI_IA10466379_AAACGGGGTGGGTCAA","cDC" 367"366","CZINY_0063_GAACGTTAGTTGTCAC","pDC" 368"367","Pan_T7980367_CAGCCGATCGGTTAAC","cDC" 369"368","Pan_T7935493_GGCCGATGTCCGTCAG","cDC" 370"369","CZINY_0059_TTTACGTAGGACCCAA","cDC" 371"370","CZINY_0057_TCGTGCTCACTAAACC","pDC" 372"371","CZINY_0057_AGGTAGGGTATGCAAA","pDC" 373"372","CZINY_0057_ATACTTCCAACAGAGC","cDC" 374"373","CZINY_0051_TACTTCAGTCTTCTAT","pDC" 375"374","CZINY_0049_CTTACCGTCAAGTCTG","cDC" 376"375","CZINY_0053_GCAGCCATCATGCCGG","cDC" 377"376","CZINY_0057_GATCACATCGACCACG","cDC" 378"377","CZINY_0063_CCGATCTAGACATACA","cDC" 379"378","Pan_T8986827_GATCGATGTTAAGAAC","cDC" 380"379","CZINY_0061_CTCGAGGAGAACGTGC","cDC" 381"380","CZINY_0057_GGTAATCGTTCTCGTC","pDC" 382"381","CZINY_0110_GTTGCGGTCTACTTCA","cDC" 383"382","CZINY_0062_TTTCAGTAGGCCGCTT","pDC" 384"383","CZINY_0056_TGCTTGCTCAGATTGC","cDC" 385"384","CZINY_0058_AGATGAAAGCCAAGTG","pDC" 386"385","Pan_T7935495_TCGAGGCAGTCGTTTG","pDC"