byarielm.fyi / scImmuCC
Hierarchical annotation of immune cells in scRNA-Seq data based on ssGSEA algorithm. Fork for large datasets with QOL improvements.
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scImmuCC / extdata / Tcell_cr2_genelist.csv
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1CD4_T,CD8_T 2CD4,CD8A 3TRDC,CD8B 4IL2RA,GZMB 5CD25,EOMES 6STAT1,TNFA 7IL2,IFNG 8CD127,CCL5 9CD152,NKG7 10CTLA4,GZMH 11CTLA-4,GZMK 12FOXP3,GZMA 13IL4,CD8 14IL10, 15IL12, 16TGFB, 17IL18, 18STAT5, 19CD4,