byarielm.fyi / scImmuCC
Hierarchical annotation of immune cells in scRNA-Seq data based on ssGSEA algorithm. Fork for large datasets with QOL improvements.
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scImmuCC / extdata / ImmuneOrNot_cr0_genelist.csv
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1Immune,Non_Immune 2PTPRC,MUC5A 3CD45,KRT5 4CSF3R,SFTPD 5FCGR3B,EPCAM 6KLRD1,CDH5 7FPR1,COL1A2 8CD8A,ACTA2 9CD1B,PECAM1 10TNFRSF17,COL3A1 11BANK1,TMSB10 12FCRL2,CALD1 13PNOC,FTH1 14CR2,COL6A2 15FCN1,FKBP1A 16GNLY, 17KIR2DL1, 18KIR3DL1, 19KIR3DL2, 20CD1E, 21CD1A, 22CD163, 23AIF1, 24CD79A, 25JCHAIN,