Hierarchical annotation of immune cells in scRNA-Seq data based on ssGSEA algorithm. Fork for large datasets with QOL improvements.
byarielm.fyi
1ILC1,ILC2,ILC3
2SYNE2,GNLY,KIT
3CCL5,KLRD1,KLRB1
4HSPA1B,CCL4,KLRD1
5CD3E,CMC,GZMK
6FYB1,NKG7,GZMH
7TRAT1,IL5,CXCL8
8DNAJB1,IL13,CD83
9TBX21,IL1RL1,LST1
10EOMES,PDE4A,IL1R1
11CXCR3,RORA,CXCL2
12IL12RB1,BCL11B,ATP1B3
13IL12RB2,PTGDR2,NRIP1
14IL18RAP,KLRG1,VEGFA
15IL18R1,IL17RB,NCOA7
16KLRD1,CRLF2,RORC
17KLRC1,,NFIL3
18KLRF1,,AHR
19,,IL23R
20,,CSF2
21,,TNF
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